Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
SCAF1Q9H7N4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC35.96■■■■□ 3.35
SCAF1Q9H7N4 AC007029.1-201ENST00000604183 313 ntBASIC35.96■■■■□ 3.35
SCAF1Q9H7N4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC35.95■■■■□ 3.35
SCAF1Q9H7N4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
SCAF1Q9H7N4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC35.94■■■■□ 3.34
SCAF1Q9H7N4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC35.94■■■■□ 3.34
SCAF1Q9H7N4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
SCAF1Q9H7N4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
SCAF1Q9H7N4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
SCAF1Q9H7N4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC35.93■■■■□ 3.34
SCAF1Q9H7N4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC35.93■■■■□ 3.34
SCAF1Q9H7N4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC35.93■■■■□ 3.34
SCAF1Q9H7N4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
SCAF1Q9H7N4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
SCAF1Q9H7N4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC35.92■■■■□ 3.34
SCAF1Q9H7N4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
SCAF1Q9H7N4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
SCAF1Q9H7N4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC35.91■■■■□ 3.34
SCAF1Q9H7N4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
SCAF1Q9H7N4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC35.91■■■■□ 3.34
SCAF1Q9H7N4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC35.9■■■■□ 3.34
SCAF1Q9H7N4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC35.9■■■■□ 3.34
SCAF1Q9H7N4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
SCAF1Q9H7N4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC35.89■■■■□ 3.34
SCAF1Q9H7N4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC35.89■■■■□ 3.34
SCAF1Q9H7N4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC35.89■■■■□ 3.34
SCAF1Q9H7N4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
SCAF1Q9H7N4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
SCAF1Q9H7N4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC35.89■■■■□ 3.34
SCAF1Q9H7N4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC35.88■■■■□ 3.33
SCAF1Q9H7N4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC35.88■■■■□ 3.33
SCAF1Q9H7N4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
SCAF1Q9H7N4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
SCAF1Q9H7N4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
SCAF1Q9H7N4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
SCAF1Q9H7N4 DUX4L9-201ENST00000449051 1259 ntBASIC35.86■■■■□ 3.33
SCAF1Q9H7N4 AC103834.1-201ENST00000520383 144 ntBASIC35.86■■■■□ 3.33
SCAF1Q9H7N4 AC093323.1-202ENST00000635031 2045 ntBASIC35.86■■■■□ 3.33
SCAF1Q9H7N4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC35.86■■■■□ 3.33
SCAF1Q9H7N4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
SCAF1Q9H7N4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC35.86■■■■□ 3.33
SCAF1Q9H7N4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC35.85■■■■□ 3.33
SCAF1Q9H7N4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC35.85■■■■□ 3.33
SCAF1Q9H7N4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC35.85■■■■□ 3.33
SCAF1Q9H7N4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC35.85■■■■□ 3.33
SCAF1Q9H7N4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC35.85■■■■□ 3.33
SCAF1Q9H7N4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC35.85■■■■□ 3.33
SCAF1Q9H7N4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
SCAF1Q9H7N4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC35.84■■■■□ 3.33
SCAF1Q9H7N4 AC110285.7-201ENST00000624417 1536 ntBASIC35.84■■■■□ 3.33
SCAF1Q9H7N4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC35.84■■■■□ 3.33
SCAF1Q9H7N4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC35.83■■■■□ 3.33
SCAF1Q9H7N4 AC126177.7-201ENST00000547904 679 ntBASIC35.83■■■■□ 3.33
SCAF1Q9H7N4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC35.83■■■■□ 3.33
SCAF1Q9H7N4 AC139795.1-202ENST00000500444 432 ntBASIC35.83■■■■□ 3.33
SCAF1Q9H7N4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC35.83■■■■□ 3.33
SCAF1Q9H7N4 AC074183.2-201ENST00000623112 922 ntBASIC35.83■■■■□ 3.33
SCAF1Q9H7N4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
SCAF1Q9H7N4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
SCAF1Q9H7N4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC35.81■■■■□ 3.32
SCAF1Q9H7N4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC35.81■■■■□ 3.32
SCAF1Q9H7N4 AL157400.5-201ENST00000507624 621 ntBASIC35.81■■■■□ 3.32
SCAF1Q9H7N4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
SCAF1Q9H7N4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SCAF1Q9H7N4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
SCAF1Q9H7N4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC35.78■■■■□ 3.32
SCAF1Q9H7N4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC35.78■■■■□ 3.32
SCAF1Q9H7N4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC35.77■■■■□ 3.32
SCAF1Q9H7N4 REST-210ENST00000638187 1334 ntTSL 5 BASIC35.77■■■■□ 3.32
SCAF1Q9H7N4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC35.76■■■■□ 3.32
SCAF1Q9H7N4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC35.76■■■■□ 3.31
SCAF1Q9H7N4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
SCAF1Q9H7N4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC35.76■■■■□ 3.31
SCAF1Q9H7N4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC35.76■■■■□ 3.31
SCAF1Q9H7N4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
SCAF1Q9H7N4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC35.76■■■■□ 3.31
SCAF1Q9H7N4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
SCAF1Q9H7N4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC35.75■■■■□ 3.31
SCAF1Q9H7N4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC35.75■■■■□ 3.31
SCAF1Q9H7N4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC35.74■■■■□ 3.31
SCAF1Q9H7N4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC35.74■■■■□ 3.31
SCAF1Q9H7N4 MIR638-201ENST00000385237 100 ntBASIC35.74■■■■□ 3.31
SCAF1Q9H7N4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC35.74■■■■□ 3.31
SCAF1Q9H7N4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
SCAF1Q9H7N4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC35.74■■■■□ 3.31
SCAF1Q9H7N4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC35.73■■■■□ 3.31
SCAF1Q9H7N4 WHAMMP2-203ENST00000563942 1603 ntBASIC35.73■■■■□ 3.31
SCAF1Q9H7N4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC35.73■■■■□ 3.31
SCAF1Q9H7N4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
SCAF1Q9H7N4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC35.73■■■■□ 3.31
SCAF1Q9H7N4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
SCAF1Q9H7N4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC35.72■■■■□ 3.31
SCAF1Q9H7N4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
SCAF1Q9H7N4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC35.71■■■■□ 3.31
SCAF1Q9H7N4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
SCAF1Q9H7N4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
SCAF1Q9H7N4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC35.7■■■■□ 3.31
SCAF1Q9H7N4 MED25-210ENST00000612854 801 ntTSL 5 BASIC35.7■■■■□ 3.31
SCAF1Q9H7N4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms