Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZCCHC4Q9H5U6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
ZCCHC4Q9H5U6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ZCCHC4Q9H5U6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ZCCHC4Q9H5U6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.29■■□□□ 1
ZCCHC4Q9H5U6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZCCHC4Q9H5U6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.29■■□□□ 1
ZCCHC4Q9H5U6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ZCCHC4Q9H5U6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
ZCCHC4Q9H5U6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.28■■□□□ 1
ZCCHC4Q9H5U6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.28■■□□□ 1
ZCCHC4Q9H5U6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
ZCCHC4Q9H5U6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZCCHC4Q9H5U6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZCCHC4Q9H5U6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZCCHC4Q9H5U6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZCCHC4Q9H5U6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZCCHC4Q9H5U6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 AL139125.2-201ENST00000623134 1869 ntBASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZCCHC4Q9H5U6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZCCHC4Q9H5U6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZCCHC4Q9H5U6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZCCHC4Q9H5U6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZCCHC4Q9H5U6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.24■□□□□ 0.99
ZCCHC4Q9H5U6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.24■□□□□ 0.99
ZCCHC4Q9H5U6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZCCHC4Q9H5U6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZCCHC4Q9H5U6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZCCHC4Q9H5U6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZCCHC4Q9H5U6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZCCHC4Q9H5U6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.23■□□□□ 0.99
ZCCHC4Q9H5U6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZCCHC4Q9H5U6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.23■□□□□ 0.99
ZCCHC4Q9H5U6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZCCHC4Q9H5U6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.23■□□□□ 0.99
ZCCHC4Q9H5U6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.23■□□□□ 0.99
ZCCHC4Q9H5U6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.22■□□□□ 0.99
ZCCHC4Q9H5U6 AC022211.4-201ENST00000625094 2161 ntBASIC21.22■□□□□ 0.99
ZCCHC4Q9H5U6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZCCHC4Q9H5U6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZCCHC4Q9H5U6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZCCHC4Q9H5U6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.22■□□□□ 0.99
ZCCHC4Q9H5U6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 AC138932.3-201ENST00000567634 1902 ntBASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZCCHC4Q9H5U6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
ZCCHC4Q9H5U6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZCCHC4Q9H5U6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZCCHC4Q9H5U6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.2■□□□□ 0.98
ZCCHC4Q9H5U6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.2■□□□□ 0.98
ZCCHC4Q9H5U6 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.2■□□□□ 0.98
ZCCHC4Q9H5U6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZCCHC4Q9H5U6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.2■□□□□ 0.98
ZCCHC4Q9H5U6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ZCCHC4Q9H5U6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZCCHC4Q9H5U6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZCCHC4Q9H5U6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZCCHC4Q9H5U6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZCCHC4Q9H5U6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZCCHC4Q9H5U6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZCCHC4Q9H5U6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZCCHC4Q9H5U6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZCCHC4Q9H5U6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZCCHC4Q9H5U6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
ZCCHC4Q9H5U6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.17■□□□□ 0.98
ZCCHC4Q9H5U6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZCCHC4Q9H5U6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZCCHC4Q9H5U6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZCCHC4Q9H5U6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms