Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDL1Q9BU40 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHRDL1Q9BU40 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRDL1Q9BU40 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRDL1Q9BU40 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.12■□□□□ 0.65
CHRDL1Q9BU40 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 AC142472.1-201ENST00000612013 1741 ntBASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.11■□□□□ 0.65
CHRDL1Q9BU40 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDL1Q9BU40 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRDL1Q9BU40 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDL1Q9BU40 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.1■□□□□ 0.65
CHRDL1Q9BU40 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDL1Q9BU40 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRDL1Q9BU40 AC020928.2-201ENST00000588717 2197 ntBASIC19.1■□□□□ 0.65
CHRDL1Q9BU40 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRDL1Q9BU40 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHRDL1Q9BU40 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHRDL1Q9BU40 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHRDL1Q9BU40 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CHRDL1Q9BU40 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CHRDL1Q9BU40 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CHRDL1Q9BU40 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRDL1Q9BU40 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRDL1Q9BU40 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CHRDL1Q9BU40 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.08■□□□□ 0.65
CHRDL1Q9BU40 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHRDL1Q9BU40 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRDL1Q9BU40 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CHRDL1Q9BU40 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.08■□□□□ 0.65
CHRDL1Q9BU40 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRDL1Q9BU40 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRDL1Q9BU40 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRDL1Q9BU40 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRDL1Q9BU40 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRDL1Q9BU40 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRDL1Q9BU40 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRDL1Q9BU40 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CHRDL1Q9BU40 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRDL1Q9BU40 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRDL1Q9BU40 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRDL1Q9BU40 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRDL1Q9BU40 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.07■□□□□ 0.64
CHRDL1Q9BU40 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRDL1Q9BU40 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRDL1Q9BU40 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.06■□□□□ 0.64
CHRDL1Q9BU40 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRDL1Q9BU40 AL359258.2-201ENST00000564063 1566 ntBASIC19.06■□□□□ 0.64
CHRDL1Q9BU40 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRDL1Q9BU40 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRDL1Q9BU40 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRDL1Q9BU40 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRDL1Q9BU40 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRDL1Q9BU40 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.05■□□□□ 0.64
CHRDL1Q9BU40 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CHRDL1Q9BU40 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.05■□□□□ 0.64
CHRDL1Q9BU40 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRDL1Q9BU40 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRDL1Q9BU40 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRDL1Q9BU40 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.04■□□□□ 0.64
CHRDL1Q9BU40 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRDL1Q9BU40 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHRDL1Q9BU40 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms