Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC10.34□□□□□ -0.75
SYNE2Q8WXH0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
SYNE2Q8WXH0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 MIR3621-201ENST00000580529 85 ntBASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 AC019171.1-201ENST00000601251 1056 ntBASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC10.33□□□□□ -0.76
SYNE2Q8WXH0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 AC010997.5-201ENST00000609182 354 ntBASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 AC092437.1-201ENST00000624794 1048 ntBASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC10.32□□□□□ -0.76
SYNE2Q8WXH0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 KRT18P5-201ENST00000436075 1291 ntBASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
SYNE2Q8WXH0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYNE2Q8WXH0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 AL136967.2-201ENST00000623968 743 ntBASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
SYNE2Q8WXH0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYNE2Q8WXH0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC10.28□□□□□ -0.76
SYNE2Q8WXH0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC10.28□□□□□ -0.76
SYNE2Q8WXH0 AC092028.1-203ENST00000608262 953 ntBASIC10.28□□□□□ -0.76
SYNE2Q8WXH0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC10.28□□□□□ -0.76
SYNE2Q8WXH0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
SYNE2Q8WXH0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC10.28□□□□□ -0.76
SYNE2Q8WXH0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYNE2Q8WXH0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC10.27□□□□□ -0.76
SYNE2Q8WXH0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
SYNE2Q8WXH0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 AL356740.2-201ENST00000601559 647 ntBASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC10.27□□□□□ -0.77
SYNE2Q8WXH0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 AC093827.2-201ENST00000512654 315 ntBASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 MIR939-201ENST00000401314 82 ntBASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SYNE2Q8WXH0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SYNE2Q8WXH0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms