Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 CLDN5-201ENST00000403084 2357 ntBASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRUB1Q8WWH5 WHAMMP3-201ENST00000611636 1609 ntBASIC22.24■■□□□ 1.15
TRUB1Q8WWH5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.24■■□□□ 1.15
TRUB1Q8WWH5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.24■■□□□ 1.15
TRUB1Q8WWH5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
TRUB1Q8WWH5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRUB1Q8WWH5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRUB1Q8WWH5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TRUB1Q8WWH5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.23■■□□□ 1.15
TRUB1Q8WWH5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.23■■□□□ 1.15
TRUB1Q8WWH5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRUB1Q8WWH5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRUB1Q8WWH5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRUB1Q8WWH5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRUB1Q8WWH5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.21■■□□□ 1.15
TRUB1Q8WWH5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TRUB1Q8WWH5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRUB1Q8WWH5 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.21■■□□□ 1.15
TRUB1Q8WWH5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRUB1Q8WWH5 AC010501.1-201ENST00000606270 1962 ntBASIC22.19■■□□□ 1.14
TRUB1Q8WWH5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRUB1Q8WWH5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.19■■□□□ 1.14
TRUB1Q8WWH5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TRUB1Q8WWH5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.19■■□□□ 1.14
TRUB1Q8WWH5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
TRUB1Q8WWH5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.18■■□□□ 1.14
TRUB1Q8WWH5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRUB1Q8WWH5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRUB1Q8WWH5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TRUB1Q8WWH5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.17■■□□□ 1.14
TRUB1Q8WWH5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRUB1Q8WWH5 AC142381.3-201ENST00000568208 1670 ntBASIC22.17■■□□□ 1.14
TRUB1Q8WWH5 AC068473.5-201ENST00000616428 2072 ntBASIC22.16■■□□□ 1.14
TRUB1Q8WWH5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRUB1Q8WWH5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TRUB1Q8WWH5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
TRUB1Q8WWH5 AC110285.7-201ENST00000624417 1536 ntBASIC22.16■■□□□ 1.14
TRUB1Q8WWH5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.16■■□□□ 1.14
TRUB1Q8WWH5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
TRUB1Q8WWH5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRUB1Q8WWH5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRUB1Q8WWH5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRUB1Q8WWH5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRUB1Q8WWH5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRUB1Q8WWH5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TRUB1Q8WWH5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRUB1Q8WWH5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 SUZ12P1-203ENST00000578195 985 ntBASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
TRUB1Q8WWH5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRUB1Q8WWH5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRUB1Q8WWH5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRUB1Q8WWH5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.12■■□□□ 1.13
TRUB1Q8WWH5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRUB1Q8WWH5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.12■■□□□ 1.13
TRUB1Q8WWH5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRUB1Q8WWH5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRUB1Q8WWH5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRUB1Q8WWH5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRUB1Q8WWH5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.11■■□□□ 1.13
TRUB1Q8WWH5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TRUB1Q8WWH5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRUB1Q8WWH5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRUB1Q8WWH5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TRUB1Q8WWH5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRUB1Q8WWH5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TRUB1Q8WWH5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRUB1Q8WWH5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRUB1Q8WWH5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRUB1Q8WWH5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.09■■□□□ 1.13
TRUB1Q8WWH5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRUB1Q8WWH5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRUB1Q8WWH5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms