Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
SMARCC2Q8TAQ2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCC2Q8TAQ2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCC2Q8TAQ2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.63■■■□□ 2.17
SMARCC2Q8TAQ2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCC2Q8TAQ2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCC2Q8TAQ2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC2Q8TAQ2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC2Q8TAQ2 RARRES2P2-201ENST00000394842 485 ntBASIC28.62■■■□□ 2.17
SMARCC2Q8TAQ2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC2Q8TAQ2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC2Q8TAQ2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC2Q8TAQ2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCC2Q8TAQ2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCC2Q8TAQ2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCC2Q8TAQ2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCC2Q8TAQ2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCC2Q8TAQ2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC2Q8TAQ2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC2Q8TAQ2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC2Q8TAQ2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC2Q8TAQ2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMARCC2Q8TAQ2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
SMARCC2Q8TAQ2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
SMARCC2Q8TAQ2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC2Q8TAQ2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC2Q8TAQ2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.59■■■□□ 2.17
SMARCC2Q8TAQ2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC2Q8TAQ2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SMARCC2Q8TAQ2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.59■■■□□ 2.17
SMARCC2Q8TAQ2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SMARCC2Q8TAQ2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.58■■■□□ 2.17
SMARCC2Q8TAQ2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.58■■■□□ 2.17
SMARCC2Q8TAQ2 AL359258.2-201ENST00000564063 1566 ntBASIC28.58■■■□□ 2.17
SMARCC2Q8TAQ2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SMARCC2Q8TAQ2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SMARCC2Q8TAQ2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SMARCC2Q8TAQ2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.56■■■□□ 2.16
SMARCC2Q8TAQ2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.56■■■□□ 2.16
SMARCC2Q8TAQ2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.55■■■□□ 2.16
SMARCC2Q8TAQ2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SMARCC2Q8TAQ2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SMARCC2Q8TAQ2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
SMARCC2Q8TAQ2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.54■■■□□ 2.16
SMARCC2Q8TAQ2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SMARCC2Q8TAQ2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.53■■■□□ 2.16
SMARCC2Q8TAQ2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SMARCC2Q8TAQ2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SMARCC2Q8TAQ2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
SMARCC2Q8TAQ2 AC092296.2-201ENST00000589470 999 ntBASIC28.53■■■□□ 2.16
SMARCC2Q8TAQ2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SMARCC2Q8TAQ2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SMARCC2Q8TAQ2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SMARCC2Q8TAQ2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SMARCC2Q8TAQ2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SMARCC2Q8TAQ2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SMARCC2Q8TAQ2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SMARCC2Q8TAQ2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SMARCC2Q8TAQ2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.49■■■□□ 2.15
SMARCC2Q8TAQ2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SMARCC2Q8TAQ2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SMARCC2Q8TAQ2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMARCC2Q8TAQ2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMARCC2Q8TAQ2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMARCC2Q8TAQ2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.47■■■□□ 2.15
SMARCC2Q8TAQ2 AL359504.2-201ENST00000605506 1601 ntBASIC28.47■■■□□ 2.15
SMARCC2Q8TAQ2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
SMARCC2Q8TAQ2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SMARCC2Q8TAQ2 ECEL1P2-201ENST00000461596 1295 ntBASIC28.47■■■□□ 2.15
SMARCC2Q8TAQ2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.47■■■□□ 2.15
SMARCC2Q8TAQ2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
SMARCC2Q8TAQ2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
SMARCC2Q8TAQ2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SMARCC2Q8TAQ2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SMARCC2Q8TAQ2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SMARCC2Q8TAQ2 AL157400.5-201ENST00000507624 621 ntBASIC28.46■■■□□ 2.15
SMARCC2Q8TAQ2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SMARCC2Q8TAQ2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SMARCC2Q8TAQ2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.46■■■□□ 2.15
SMARCC2Q8TAQ2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.45■■■□□ 2.15
SMARCC2Q8TAQ2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SMARCC2Q8TAQ2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.45■■■□□ 2.14
SMARCC2Q8TAQ2 ABHD17AP5-201ENST00000580133 923 ntBASIC28.45■■■□□ 2.14
SMARCC2Q8TAQ2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SMARCC2Q8TAQ2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SMARCC2Q8TAQ2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SMARCC2Q8TAQ2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.44■■■□□ 2.14
SMARCC2Q8TAQ2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SMARCC2Q8TAQ2 ERN1-208ENST00000606895 2068 ntBASIC28.43■■■□□ 2.14
SMARCC2Q8TAQ2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SMARCC2Q8TAQ2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.43■■■□□ 2.14
SMARCC2Q8TAQ2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SMARCC2Q8TAQ2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.43■■■□□ 2.14
SMARCC2Q8TAQ2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.43■■■□□ 2.14
SMARCC2Q8TAQ2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.43■■■□□ 2.14
SMARCC2Q8TAQ2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SMARCC2Q8TAQ2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SMARCC2Q8TAQ2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.42■■■□□ 2.14
SMARCC2Q8TAQ2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SMARCC2Q8TAQ2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms