Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM104Q8NE00 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM104Q8NE00 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM104Q8NE00 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM104Q8NE00 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM104Q8NE00 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
TMEM104Q8NE00 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
TMEM104Q8NE00 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM104Q8NE00 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM104Q8NE00 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM104Q8NE00 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM104Q8NE00 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM104Q8NE00 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM104Q8NE00 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM104Q8NE00 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM104Q8NE00 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM104Q8NE00 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM104Q8NE00 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM104Q8NE00 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM104Q8NE00 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 LINC01971-201ENST00000617888 1048 ntBASIC20.74■□□□□ 0.91
TMEM104Q8NE00 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TMEM104Q8NE00 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM104Q8NE00 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM104Q8NE00 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM104Q8NE00 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM104Q8NE00 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM104Q8NE00 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM104Q8NE00 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM104Q8NE00 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM104Q8NE00 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TMEM104Q8NE00 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM104Q8NE00 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM104Q8NE00 MIR219A2-201ENST00000608502 1504 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM104Q8NE00 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TMEM104Q8NE00 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L13-201ENST00000554103 1267 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L15-201ENST00000611059 1267 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L23-201ENST00000615195 1269 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L24-201ENST00000617576 1269 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L22-201ENST00000618238 1269 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L20-201ENST00000619712 1269 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L21-201ENST00000622058 1269 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L10-201ENST00000622460 1267 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 DUX4L25-201ENST00000624915 1269 ntBASIC20.7■□□□□ 0.9
TMEM104Q8NE00 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
TMEM104Q8NE00 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TMEM104Q8NE00 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 AC096887.2-201ENST00000623443 1957 ntBASIC20.68■□□□□ 0.9
TMEM104Q8NE00 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TMEM104Q8NE00 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM104Q8NE00 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM104Q8NE00 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TMEM104Q8NE00 AC142381.3-201ENST00000568208 1670 ntBASIC20.67■□□□□ 0.9
TMEM104Q8NE00 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TMEM104Q8NE00 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM104Q8NE00 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM104Q8NE00 AC008813.1-201ENST00000536597 885 ntBASIC20.66■□□□□ 0.9
TMEM104Q8NE00 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM104Q8NE00 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TMEM104Q8NE00 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.66■□□□□ 0.9
TMEM104Q8NE00 AC022211.4-201ENST00000625094 2161 ntBASIC20.65■□□□□ 0.9
TMEM104Q8NE00 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TMEM104Q8NE00 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TMEM104Q8NE00 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TMEM104Q8NE00 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.65■□□□□ 0.9
TMEM104Q8NE00 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TMEM104Q8NE00 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.65■□□□□ 0.9
TMEM104Q8NE00 AC148477.6-201ENST00000623746 465 ntBASIC20.65■□□□□ 0.9
TMEM104Q8NE00 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
TMEM104Q8NE00 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
TMEM104Q8NE00 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM104Q8NE00 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TMEM104Q8NE00 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms