Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L13-201ENST00000554103 1267 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L15-201ENST00000611059 1267 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L23-201ENST00000615195 1269 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L24-201ENST00000617576 1269 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L22-201ENST00000618238 1269 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L20-201ENST00000619712 1269 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L21-201ENST00000622058 1269 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L10-201ENST00000622460 1267 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 DUX4L25-201ENST00000624915 1269 ntBASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CCNYL1Q8N7R7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.87■■□□□ 1.41
CCNYL1Q8N7R7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CCNYL1Q8N7R7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCNYL1Q8N7R7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.87■■□□□ 1.41
CCNYL1Q8N7R7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CCNYL1Q8N7R7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNYL1Q8N7R7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCNYL1Q8N7R7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.87■■□□□ 1.41
CCNYL1Q8N7R7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCNYL1Q8N7R7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCNYL1Q8N7R7 MIR219A2-201ENST00000608502 1504 ntBASIC23.85■■□□□ 1.41
CCNYL1Q8N7R7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.85■■□□□ 1.41
CCNYL1Q8N7R7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
CCNYL1Q8N7R7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CCNYL1Q8N7R7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
CCNYL1Q8N7R7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCNYL1Q8N7R7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCNYL1Q8N7R7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCNYL1Q8N7R7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.84■■□□□ 1.41
CCNYL1Q8N7R7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCNYL1Q8N7R7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCNYL1Q8N7R7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CCNYL1Q8N7R7 AC008813.1-201ENST00000536597 885 ntBASIC23.84■■□□□ 1.41
CCNYL1Q8N7R7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCNYL1Q8N7R7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CCNYL1Q8N7R7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNYL1Q8N7R7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNYL1Q8N7R7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCNYL1Q8N7R7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCNYL1Q8N7R7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCNYL1Q8N7R7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCNYL1Q8N7R7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.82■■□□□ 1.4
CCNYL1Q8N7R7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.82■■□□□ 1.4
CCNYL1Q8N7R7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCNYL1Q8N7R7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCNYL1Q8N7R7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CCNYL1Q8N7R7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 DUX4L11-201ENST00000611504 1267 ntBASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 DUX4L12-201ENST00000614593 1267 ntBASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 DUX4L14-201ENST00000621227 1267 ntBASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCNYL1Q8N7R7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL1Q8N7R7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL1Q8N7R7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL1Q8N7R7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL1Q8N7R7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.8■■□□□ 1.4
CCNYL1Q8N7R7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL1Q8N7R7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL1Q8N7R7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCNYL1Q8N7R7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
CCNYL1Q8N7R7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNYL1Q8N7R7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.79■■□□□ 1.4
CCNYL1Q8N7R7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCNYL1Q8N7R7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCNYL1Q8N7R7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL1Q8N7R7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL1Q8N7R7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL1Q8N7R7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL1Q8N7R7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL1Q8N7R7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL1Q8N7R7 AC148477.6-201ENST00000623746 465 ntBASIC23.78■■□□□ 1.4
CCNYL1Q8N7R7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCNYL1Q8N7R7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CCNYL1Q8N7R7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNYL1Q8N7R7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNYL1Q8N7R7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNYL1Q8N7R7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.77■■□□□ 1.4
CCNYL1Q8N7R7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNYL1Q8N7R7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.77■■□□□ 1.4
CCNYL1Q8N7R7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNYL1Q8N7R7 AC093323.1-202ENST00000635031 2045 ntBASIC23.76■■□□□ 1.39
CCNYL1Q8N7R7 AL359258.2-201ENST00000564063 1566 ntBASIC23.76■■□□□ 1.39
CCNYL1Q8N7R7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL1Q8N7R7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL1Q8N7R7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNYL1Q8N7R7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNYL1Q8N7R7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.75■■□□□ 1.39
CCNYL1Q8N7R7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms