Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TRIM59Q8IWR1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
TRIM59Q8IWR1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRIM59Q8IWR1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 AC126177.7-201ENST00000547904 679 ntBASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 AC010501.1-201ENST00000606270 1962 ntBASIC26.57■■□□□ 1.84
TRIM59Q8IWR1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM59Q8IWR1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM59Q8IWR1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.55■■□□□ 1.84
TRIM59Q8IWR1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.55■■□□□ 1.84
TRIM59Q8IWR1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM59Q8IWR1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM59Q8IWR1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM59Q8IWR1 MIR639-201ENST00000384974 98 ntBASIC26.54■■□□□ 1.84
TRIM59Q8IWR1 AC020928.2-201ENST00000588717 2197 ntBASIC26.53■■□□□ 1.84
TRIM59Q8IWR1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM59Q8IWR1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM59Q8IWR1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM59Q8IWR1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
TRIM59Q8IWR1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
TRIM59Q8IWR1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
TRIM59Q8IWR1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.51■■□□□ 1.84
TRIM59Q8IWR1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
TRIM59Q8IWR1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM59Q8IWR1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM59Q8IWR1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.5■■□□□ 1.83
TRIM59Q8IWR1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.5■■□□□ 1.83
TRIM59Q8IWR1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM59Q8IWR1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM59Q8IWR1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM59Q8IWR1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM59Q8IWR1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.49■■□□□ 1.83
TRIM59Q8IWR1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 AL157400.5-201ENST00000507624 621 ntBASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM59Q8IWR1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM59Q8IWR1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM59Q8IWR1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM59Q8IWR1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM59Q8IWR1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.46■■□□□ 1.83
TRIM59Q8IWR1 AC060814.1-201ENST00000554326 538 ntBASIC26.46■■□□□ 1.83
TRIM59Q8IWR1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM59Q8IWR1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM59Q8IWR1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.45■■□□□ 1.82
TRIM59Q8IWR1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.45■■□□□ 1.82
TRIM59Q8IWR1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM59Q8IWR1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM59Q8IWR1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM59Q8IWR1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 AC096887.2-201ENST00000623443 1957 ntBASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.43■■□□□ 1.82
TRIM59Q8IWR1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
TRIM59Q8IWR1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM59Q8IWR1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM59Q8IWR1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM59Q8IWR1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms