Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00346Q8IVM7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00346Q8IVM7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.52■■□□□ 1.04
LINC00346Q8IVM7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC00346Q8IVM7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00346Q8IVM7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LINC00346Q8IVM7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00346Q8IVM7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00346Q8IVM7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LINC00346Q8IVM7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LINC00346Q8IVM7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00346Q8IVM7 ERN1-208ENST00000606895 2068 ntBASIC21.51■■□□□ 1.03
LINC00346Q8IVM7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00346Q8IVM7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00346Q8IVM7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00346Q8IVM7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINC00346Q8IVM7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.49■■□□□ 1.03
LINC00346Q8IVM7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
LINC00346Q8IVM7 AL359504.2-201ENST00000605506 1601 ntBASIC21.49■■□□□ 1.03
LINC00346Q8IVM7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LINC00346Q8IVM7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINC00346Q8IVM7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.48■■□□□ 1.03
LINC00346Q8IVM7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.48■■□□□ 1.03
LINC00346Q8IVM7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
LINC00346Q8IVM7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.48■■□□□ 1.03
LINC00346Q8IVM7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 AC020928.2-201ENST00000588717 2197 ntBASIC21.47■■□□□ 1.03
LINC00346Q8IVM7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00346Q8IVM7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00346Q8IVM7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00346Q8IVM7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00346Q8IVM7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.46■■□□□ 1.03
LINC00346Q8IVM7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00346Q8IVM7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINC00346Q8IVM7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
LINC00346Q8IVM7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LINC00346Q8IVM7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.45■■□□□ 1.02
LINC00346Q8IVM7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
LINC00346Q8IVM7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.45■■□□□ 1.02
LINC00346Q8IVM7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00346Q8IVM7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LINC00346Q8IVM7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
LINC00346Q8IVM7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LINC00346Q8IVM7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
LINC00346Q8IVM7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LINC00346Q8IVM7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.44■■□□□ 1.02
LINC00346Q8IVM7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LINC00346Q8IVM7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LINC00346Q8IVM7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LINC00346Q8IVM7 AC126177.7-201ENST00000547904 679 ntBASIC21.43■■□□□ 1.02
LINC00346Q8IVM7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
LINC00346Q8IVM7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
LINC00346Q8IVM7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.43■■□□□ 1.02
LINC00346Q8IVM7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00346Q8IVM7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LINC00346Q8IVM7 AC010501.1-201ENST00000606270 1962 ntBASIC21.41■■□□□ 1.02
LINC00346Q8IVM7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LINC00346Q8IVM7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LINC00346Q8IVM7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LINC00346Q8IVM7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LINC00346Q8IVM7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LINC00346Q8IVM7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.4■■□□□ 1.02
LINC00346Q8IVM7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LINC00346Q8IVM7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
LINC00346Q8IVM7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINC00346Q8IVM7 AC135731.1-201ENST00000569415 2548 ntBASIC21.39■■□□□ 1.01
LINC00346Q8IVM7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LINC00346Q8IVM7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINC00346Q8IVM7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINC00346Q8IVM7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINC00346Q8IVM7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINC00346Q8IVM7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LINC00346Q8IVM7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.38■■□□□ 1.01
LINC00346Q8IVM7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.38■■□□□ 1.01
LINC00346Q8IVM7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LINC00346Q8IVM7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00346Q8IVM7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00346Q8IVM7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.37■■□□□ 1.01
LINC00346Q8IVM7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00346Q8IVM7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00346Q8IVM7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00346Q8IVM7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LINC00346Q8IVM7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LINC00346Q8IVM7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LINC00346Q8IVM7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms