Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.29■■□□□ 1.64
RFX6Q8HWS3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RFX6Q8HWS3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.28■■□□□ 1.64
RFX6Q8HWS3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RFX6Q8HWS3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RFX6Q8HWS3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.28■■□□□ 1.64
RFX6Q8HWS3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RFX6Q8HWS3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.28■■□□□ 1.64
RFX6Q8HWS3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
RFX6Q8HWS3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RFX6Q8HWS3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RFX6Q8HWS3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
RFX6Q8HWS3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RFX6Q8HWS3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.26■■□□□ 1.63
RFX6Q8HWS3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RFX6Q8HWS3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RFX6Q8HWS3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RFX6Q8HWS3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RFX6Q8HWS3 ERN1-208ENST00000606895 2068 ntBASIC25.25■■□□□ 1.63
RFX6Q8HWS3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RFX6Q8HWS3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RFX6Q8HWS3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
RFX6Q8HWS3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RFX6Q8HWS3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RFX6Q8HWS3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.24■■□□□ 1.63
RFX6Q8HWS3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RFX6Q8HWS3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RFX6Q8HWS3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFX6Q8HWS3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
RFX6Q8HWS3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFX6Q8HWS3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
RFX6Q8HWS3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RFX6Q8HWS3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RFX6Q8HWS3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
RFX6Q8HWS3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RFX6Q8HWS3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RFX6Q8HWS3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.21■■□□□ 1.63
RFX6Q8HWS3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFX6Q8HWS3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RFX6Q8HWS3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RFX6Q8HWS3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.2■■□□□ 1.62
RFX6Q8HWS3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFX6Q8HWS3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFX6Q8HWS3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFX6Q8HWS3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RFX6Q8HWS3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RFX6Q8HWS3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.19■■□□□ 1.62
RFX6Q8HWS3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.19■■□□□ 1.62
RFX6Q8HWS3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RFX6Q8HWS3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.18■■□□□ 1.62
RFX6Q8HWS3 AC010501.1-201ENST00000606270 1962 ntBASIC25.18■■□□□ 1.62
RFX6Q8HWS3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.18■■□□□ 1.62
RFX6Q8HWS3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RFX6Q8HWS3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.16■■□□□ 1.62
RFX6Q8HWS3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.16■■□□□ 1.62
RFX6Q8HWS3 MIR639-201ENST00000384974 98 ntBASIC25.16■■□□□ 1.62
RFX6Q8HWS3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RFX6Q8HWS3 AC020928.2-201ENST00000588717 2197 ntBASIC25.16■■□□□ 1.62
RFX6Q8HWS3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RFX6Q8HWS3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFX6Q8HWS3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RFX6Q8HWS3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RFX6Q8HWS3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RFX6Q8HWS3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
RFX6Q8HWS3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RFX6Q8HWS3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RFX6Q8HWS3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RFX6Q8HWS3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFX6Q8HWS3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
RFX6Q8HWS3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.14■■□□□ 1.61
RFX6Q8HWS3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RFX6Q8HWS3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFX6Q8HWS3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RFX6Q8HWS3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFX6Q8HWS3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFX6Q8HWS3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.12■■□□□ 1.61
RFX6Q8HWS3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms