Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.88■■■□□ 2.69
RGPD4Q7Z3J3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RGPD4Q7Z3J3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RGPD4Q7Z3J3 RPS2P7-201ENST00000447334 885 ntBASIC31.86■■■□□ 2.69
RGPD4Q7Z3J3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RGPD4Q7Z3J3 AC022616.5-201ENST00000518796 181 ntBASIC31.86■■■□□ 2.69
RGPD4Q7Z3J3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RGPD4Q7Z3J3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RGPD4Q7Z3J3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RGPD4Q7Z3J3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
RGPD4Q7Z3J3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RGPD4Q7Z3J3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.84■■■□□ 2.69
RGPD4Q7Z3J3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.83■■■□□ 2.69
RGPD4Q7Z3J3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.82■■■□□ 2.69
RGPD4Q7Z3J3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
RGPD4Q7Z3J3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RGPD4Q7Z3J3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.82■■■□□ 2.68
RGPD4Q7Z3J3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.82■■■□□ 2.68
RGPD4Q7Z3J3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
RGPD4Q7Z3J3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RGPD4Q7Z3J3 AL359504.2-201ENST00000605506 1601 ntBASIC31.82■■■□□ 2.68
RGPD4Q7Z3J3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
RGPD4Q7Z3J3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
RGPD4Q7Z3J3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.81■■■□□ 2.68
RGPD4Q7Z3J3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RGPD4Q7Z3J3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
RGPD4Q7Z3J3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RGPD4Q7Z3J3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RGPD4Q7Z3J3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RGPD4Q7Z3J3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
RGPD4Q7Z3J3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD4Q7Z3J3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD4Q7Z3J3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD4Q7Z3J3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD4Q7Z3J3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD4Q7Z3J3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD4Q7Z3J3 AL136116.3-201ENST00000402907 1138 ntBASIC31.79■■■□□ 2.68
RGPD4Q7Z3J3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RGPD4Q7Z3J3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.78■■■□□ 2.68
RGPD4Q7Z3J3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
RGPD4Q7Z3J3 AC137630.3-201ENST00000607245 391 ntBASIC31.78■■■□□ 2.68
RGPD4Q7Z3J3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.78■■■□□ 2.68
RGPD4Q7Z3J3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.77■■■□□ 2.68
RGPD4Q7Z3J3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.77■■■□□ 2.68
RGPD4Q7Z3J3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.77■■■□□ 2.68
RGPD4Q7Z3J3 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.77■■■□□ 2.68
RGPD4Q7Z3J3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.76■■■□□ 2.68
RGPD4Q7Z3J3 AL117332.1-201ENST00000622628 974 ntBASIC31.76■■■□□ 2.68
RGPD4Q7Z3J3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
RGPD4Q7Z3J3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
RGPD4Q7Z3J3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
RGPD4Q7Z3J3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RGPD4Q7Z3J3 AC021242.3-201ENST00000607598 1377 ntBASIC31.76■■■□□ 2.67
RGPD4Q7Z3J3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
RGPD4Q7Z3J3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RGPD4Q7Z3J3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.75■■■□□ 2.67
RGPD4Q7Z3J3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RGPD4Q7Z3J3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.74■■■□□ 2.67
RGPD4Q7Z3J3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.73■■■□□ 2.67
RGPD4Q7Z3J3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.72■■■□□ 2.67
RGPD4Q7Z3J3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RGPD4Q7Z3J3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
RGPD4Q7Z3J3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
RGPD4Q7Z3J3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.71■■■□□ 2.67
RGPD4Q7Z3J3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.71■■■□□ 2.67
RGPD4Q7Z3J3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.71■■■□□ 2.67
RGPD4Q7Z3J3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RGPD4Q7Z3J3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RGPD4Q7Z3J3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.69■■■□□ 2.66
RGPD4Q7Z3J3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
RGPD4Q7Z3J3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
RGPD4Q7Z3J3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.68■■■□□ 2.66
RGPD4Q7Z3J3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RGPD4Q7Z3J3 KRT18P24-201ENST00000344739 1156 ntBASIC31.68■■■□□ 2.66
RGPD4Q7Z3J3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.68■■■□□ 2.66
RGPD4Q7Z3J3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.68■■■□□ 2.66
RGPD4Q7Z3J3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
RGPD4Q7Z3J3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.67■■■□□ 2.66
RGPD4Q7Z3J3 TSPY9P-201ENST00000440215 945 ntBASIC31.66■■■□□ 2.66
RGPD4Q7Z3J3 TSPY11P-201ENST00000442607 1045 ntBASIC31.66■■■□□ 2.66
RGPD4Q7Z3J3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
RGPD4Q7Z3J3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
RGPD4Q7Z3J3 WHAMMP3-201ENST00000611636 1609 ntBASIC31.66■■■□□ 2.66
RGPD4Q7Z3J3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RGPD4Q7Z3J3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.66■■■□□ 2.66
RGPD4Q7Z3J3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.66■■■□□ 2.66
RGPD4Q7Z3J3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RGPD4Q7Z3J3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RGPD4Q7Z3J3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.65■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms