Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST2H3AQ71DI3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIST2H3AQ71DI3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIST2H3AQ71DI3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIST2H3AQ71DI3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HIST2H3AQ71DI3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.37■■□□□ 1.01
HIST2H3AQ71DI3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
HIST2H3AQ71DI3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HIST2H3AQ71DI3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST2H3AQ71DI3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HIST2H3AQ71DI3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST2H3AQ71DI3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HIST2H3AQ71DI3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HIST2H3AQ71DI3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.36■■□□□ 1.01
HIST2H3AQ71DI3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST2H3AQ71DI3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST2H3AQ71DI3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HIST2H3AQ71DI3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
HIST2H3AQ71DI3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.34■■□□□ 1.01
HIST2H3AQ71DI3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST2H3AQ71DI3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIST2H3AQ71DI3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.34■■□□□ 1.01
HIST2H3AQ71DI3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HIST2H3AQ71DI3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
HIST2H3AQ71DI3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HIST2H3AQ71DI3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIST2H3AQ71DI3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HIST2H3AQ71DI3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HIST2H3AQ71DI3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HIST2H3AQ71DI3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 AC060814.1-201ENST00000554326 538 ntBASIC21.32■■□□□ 1
HIST2H3AQ71DI3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HIST2H3AQ71DI3 AL157400.5-201ENST00000507624 621 ntBASIC21.31■■□□□ 1
HIST2H3AQ71DI3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIST2H3AQ71DI3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
HIST2H3AQ71DI3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
HIST2H3AQ71DI3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.31■■□□□ 1
HIST2H3AQ71DI3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIST2H3AQ71DI3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST2H3AQ71DI3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST2H3AQ71DI3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.3■■□□□ 1
HIST2H3AQ71DI3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
HIST2H3AQ71DI3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIST2H3AQ71DI3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.3■■□□□ 1
HIST2H3AQ71DI3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.29■■□□□ 1
HIST2H3AQ71DI3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HIST2H3AQ71DI3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HIST2H3AQ71DI3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST2H3AQ71DI3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.29■■□□□ 1
HIST2H3AQ71DI3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIST2H3AQ71DI3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HIST2H3AQ71DI3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.29■■□□□ 1
HIST2H3AQ71DI3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST2H3AQ71DI3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST2H3AQ71DI3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HIST2H3AQ71DI3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HIST2H3AQ71DI3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST2H3AQ71DI3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST2H3AQ71DI3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIST2H3AQ71DI3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
HIST2H3AQ71DI3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST2H3AQ71DI3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST2H3AQ71DI3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.27■■□□□ 1
HIST2H3AQ71DI3 MIR4449-201ENST00000578365 66 ntBASIC21.27■■□□□ 1
HIST2H3AQ71DI3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.27■■□□□ 1
HIST2H3AQ71DI3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HIST2H3AQ71DI3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HIST2H3AQ71DI3 AC010501.1-201ENST00000606270 1962 ntBASIC21.27■□□□□ 0.99
HIST2H3AQ71DI3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST2H3AQ71DI3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H3AQ71DI3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H3AQ71DI3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H3AQ71DI3 AC092296.2-201ENST00000589470 999 ntBASIC21.26■□□□□ 0.99
HIST2H3AQ71DI3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.26■□□□□ 0.99
HIST2H3AQ71DI3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIST2H3AQ71DI3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H3AQ71DI3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H3AQ71DI3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST2H3AQ71DI3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.25■□□□□ 0.99
HIST2H3AQ71DI3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.25■□□□□ 0.99
HIST2H3AQ71DI3 AC025884.2-201ENST00000553429 711 ntBASIC21.25■□□□□ 0.99
HIST2H3AQ71DI3 ERN1-208ENST00000606895 2068 ntBASIC21.25■□□□□ 0.99
HIST2H3AQ71DI3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.25■□□□□ 0.99
HIST2H3AQ71DI3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HIST2H3AQ71DI3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H3AQ71DI3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H3AQ71DI3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST2H3AQ71DI3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H3AQ71DI3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H3AQ71DI3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST2H3AQ71DI3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms