Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RPP38P78345 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RPP38P78345 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.92■■□□□ 1.26
RPP38P78345 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
RPP38P78345 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RPP38P78345 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.92■■□□□ 1.26
RPP38P78345 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.92■■□□□ 1.26
RPP38P78345 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.92■■□□□ 1.26
RPP38P78345 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
RPP38P78345 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPP38P78345 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.91■■□□□ 1.26
RPP38P78345 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.91■■□□□ 1.26
RPP38P78345 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPP38P78345 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.91■■□□□ 1.26
RPP38P78345 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPP38P78345 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPP38P78345 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPP38P78345 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RPP38P78345 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RPP38P78345 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RPP38P78345 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RPP38P78345 GPX1-201ENST00000419349 1106 ntBASIC22.9■■□□□ 1.26
RPP38P78345 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.9■■□□□ 1.26
RPP38P78345 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.9■■□□□ 1.26
RPP38P78345 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RPP38P78345 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPP38P78345 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RPP38P78345 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
RPP38P78345 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
RPP38P78345 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RPP38P78345 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.89■■□□□ 1.26
RPP38P78345 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.26
RPP38P78345 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.89■■□□□ 1.25
RPP38P78345 HSD17B1P1-201ENST00000590052 955 ntBASIC22.89■■□□□ 1.25
RPP38P78345 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RPP38P78345 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP38P78345 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP38P78345 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.88■■□□□ 1.25
RPP38P78345 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP38P78345 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.88■■□□□ 1.25
RPP38P78345 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP38P78345 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RPP38P78345 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.88■■□□□ 1.25
RPP38P78345 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPP38P78345 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPP38P78345 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RPP38P78345 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RPP38P78345 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RPP38P78345 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.86■■□□□ 1.25
RPP38P78345 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.86■■□□□ 1.25
RPP38P78345 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RPP38P78345 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RPP38P78345 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RPP38P78345 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RPP38P78345 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.85■■□□□ 1.25
RPP38P78345 AC060814.1-201ENST00000554326 538 ntBASIC22.85■■□□□ 1.25
RPP38P78345 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RPP38P78345 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.85■■□□□ 1.25
RPP38P78345 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
RPP38P78345 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RPP38P78345 DUSP8P4-201ENST00000399538 1761 ntBASIC22.84■■□□□ 1.25
RPP38P78345 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RPP38P78345 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RPP38P78345 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RPP38P78345 AL359258.2-201ENST00000564063 1566 ntBASIC22.84■■□□□ 1.25
RPP38P78345 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RPP38P78345 AC092803.2-201ENST00000564287 1899 ntBASIC22.83■■□□□ 1.24
RPP38P78345 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.82■■□□□ 1.24
RPP38P78345 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RPP38P78345 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RPP38P78345 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RPP38P78345 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.82■■□□□ 1.24
RPP38P78345 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.81■■□□□ 1.24
RPP38P78345 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RPP38P78345 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.81■■□□□ 1.24
RPP38P78345 RNF126P1-201ENST00000567452 1320 ntBASIC22.81■■□□□ 1.24
RPP38P78345 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RPP38P78345 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.79■■□□□ 1.24
RPP38P78345 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
RPP38P78345 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.79■■□□□ 1.24
RPP38P78345 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RPP38P78345 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.79■■□□□ 1.24
RPP38P78345 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
RPP38P78345 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
RPP38P78345 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
RPP38P78345 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
RPP38P78345 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.78■■□□□ 1.24
RPP38P78345 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RPP38P78345 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.78■■□□□ 1.24
RPP38P78345 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.78■■□□□ 1.24
RPP38P78345 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.78■■□□□ 1.24
RPP38P78345 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
RPP38P78345 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
RPP38P78345 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.78■■□□□ 1.24
RPP38P78345 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
RPP38P78345 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.78■■□□□ 1.24
RPP38P78345 AC093323.1-202ENST00000635031 2045 ntBASIC22.77■■□□□ 1.24
RPP38P78345 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RPP38P78345 WHAMMP3-201ENST00000611636 1609 ntBASIC22.77■■□□□ 1.24
RPP38P78345 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms