Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SEC61A1P61619 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SEC61A1P61619 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.1■□□□□ 0.97
SEC61A1P61619 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A1P61619 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A1P61619 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.09■□□□□ 0.97
SEC61A1P61619 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SEC61A1P61619 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A1P61619 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.09■□□□□ 0.97
SEC61A1P61619 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A1P61619 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A1P61619 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEC61A1P61619 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SEC61A1P61619 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
SEC61A1P61619 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEC61A1P61619 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEC61A1P61619 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SEC61A1P61619 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.08■□□□□ 0.97
SEC61A1P61619 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SEC61A1P61619 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SEC61A1P61619 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SEC61A1P61619 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEC61A1P61619 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEC61A1P61619 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SEC61A1P61619 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEC61A1P61619 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.07■□□□□ 0.96
SEC61A1P61619 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.07■□□□□ 0.96
SEC61A1P61619 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
SEC61A1P61619 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEC61A1P61619 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEC61A1P61619 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.07■□□□□ 0.96
SEC61A1P61619 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A1P61619 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A1P61619 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A1P61619 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A1P61619 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A1P61619 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.06■□□□□ 0.96
SEC61A1P61619 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.06■□□□□ 0.96
SEC61A1P61619 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEC61A1P61619 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEC61A1P61619 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEC61A1P61619 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.05■□□□□ 0.96
SEC61A1P61619 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A1P61619 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A1P61619 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SEC61A1P61619 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A1P61619 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SEC61A1P61619 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A1P61619 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.04■□□□□ 0.96
SEC61A1P61619 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEC61A1P61619 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.03■□□□□ 0.96
SEC61A1P61619 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SEC61A1P61619 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SEC61A1P61619 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SEC61A1P61619 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SEC61A1P61619 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SEC61A1P61619 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.01■□□□□ 0.95
SEC61A1P61619 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.01■□□□□ 0.95
SEC61A1P61619 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEC61A1P61619 MIR219A2-201ENST00000608502 1504 ntBASIC21.01■□□□□ 0.95
SEC61A1P61619 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEC61A1P61619 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.01■□□□□ 0.95
SEC61A1P61619 AC148477.6-201ENST00000623746 465 ntBASIC21.01■□□□□ 0.95
SEC61A1P61619 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEC61A1P61619 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.01■□□□□ 0.95
SEC61A1P61619 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SEC61A1P61619 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SEC61A1P61619 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SEC61A1P61619 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21■□□□□ 0.95
SEC61A1P61619 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEC61A1P61619 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21■□□□□ 0.95
SEC61A1P61619 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21■□□□□ 0.95
SEC61A1P61619 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEC61A1P61619 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEC61A1P61619 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEC61A1P61619 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SEC61A1P61619 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21■□□□□ 0.95
SEC61A1P61619 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SEC61A1P61619 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A1P61619 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A1P61619 GPX1-201ENST00000419349 1106 ntBASIC20.99■□□□□ 0.95
SEC61A1P61619 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A1P61619 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.99■□□□□ 0.95
SEC61A1P61619 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SEC61A1P61619 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.99■□□□□ 0.95
SEC61A1P61619 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SEC61A1P61619 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.99■□□□□ 0.95
SEC61A1P61619 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SEC61A1P61619 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A1P61619 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A1P61619 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SEC61A1P61619 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.98■□□□□ 0.95
SEC61A1P61619 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEC61A1P61619 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A1P61619 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.97■□□□□ 0.95
SEC61A1P61619 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A1P61619 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A1P61619 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A1P61619 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.97■□□□□ 0.95
SEC61A1P61619 AC018358.1-201ENST00000631079 1402 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms