Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PER3P56645 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.34■■□□□ 1.17
PER3P56645 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.34■■□□□ 1.17
PER3P56645 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.34■■□□□ 1.17
PER3P56645 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PER3P56645 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
PER3P56645 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.33■■□□□ 1.17
PER3P56645 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PER3P56645 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.33■■□□□ 1.17
PER3P56645 YBX1P4-201ENST00000392794 808 ntBASIC22.33■■□□□ 1.17
PER3P56645 AC139795.1-202ENST00000500444 432 ntBASIC22.33■■□□□ 1.17
PER3P56645 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
PER3P56645 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.32■■□□□ 1.16
PER3P56645 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PER3P56645 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.32■■□□□ 1.16
PER3P56645 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.32■■□□□ 1.16
PER3P56645 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PER3P56645 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.32■■□□□ 1.16
PER3P56645 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PER3P56645 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PER3P56645 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PER3P56645 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PER3P56645 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PER3P56645 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PER3P56645 AC026202.3-201ENST00000600805 1127 ntBASIC22.31■■□□□ 1.16
PER3P56645 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PER3P56645 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.3■■□□□ 1.16
PER3P56645 RP9P-202ENST00000450133 1212 ntBASIC22.3■■□□□ 1.16
PER3P56645 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.3■■□□□ 1.16
PER3P56645 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PER3P56645 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.3■■□□□ 1.16
PER3P56645 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PER3P56645 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PER3P56645 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PER3P56645 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PER3P56645 DUX4L9-201ENST00000449051 1259 ntBASIC22.29■■□□□ 1.16
PER3P56645 AC131212.1-201ENST00000613771 668 ntBASIC22.29■■□□□ 1.16
PER3P56645 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PER3P56645 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PER3P56645 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PER3P56645 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PER3P56645 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PER3P56645 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PER3P56645 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PER3P56645 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PER3P56645 AP002414.2-202ENST00000590929 1450 ntBASIC22.28■■□□□ 1.16
PER3P56645 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
PER3P56645 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PER3P56645 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PER3P56645 KRT8P33-201ENST00000508125 1423 ntBASIC22.27■■□□□ 1.16
PER3P56645 AL359258.2-201ENST00000564063 1566 ntBASIC22.27■■□□□ 1.16
PER3P56645 AC010980.1-201ENST00000587192 1142 ntBASIC22.27■■□□□ 1.16
PER3P56645 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PER3P56645 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.27■■□□□ 1.16
PER3P56645 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
PER3P56645 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PER3P56645 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.26■■□□□ 1.15
PER3P56645 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.26■■□□□ 1.15
PER3P56645 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.26■■□□□ 1.15
PER3P56645 AC009299.2-201ENST00000482477 511 ntBASIC22.26■■□□□ 1.15
PER3P56645 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PER3P56645 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.25■■□□□ 1.15
PER3P56645 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.25■■□□□ 1.15
PER3P56645 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.25■■□□□ 1.15
PER3P56645 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PER3P56645 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PER3P56645 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
PER3P56645 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
PER3P56645 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PER3P56645 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PER3P56645 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PER3P56645 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PER3P56645 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PER3P56645 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PER3P56645 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PER3P56645 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PER3P56645 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PER3P56645 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.23■■□□□ 1.15
PER3P56645 AC093536.1-201ENST00000569153 554 ntBASIC22.23■■□□□ 1.15
PER3P56645 MIR6765-201ENST00000614092 87 ntBASIC22.23■■□□□ 1.15
PER3P56645 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.23■■□□□ 1.15
PER3P56645 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PER3P56645 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.22■■□□□ 1.15
PER3P56645 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.22■■□□□ 1.15
PER3P56645 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PER3P56645 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PER3P56645 AC025884.2-201ENST00000553429 711 ntBASIC22.22■■□□□ 1.15
PER3P56645 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PER3P56645 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PER3P56645 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PER3P56645 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PER3P56645 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PER3P56645 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.21■■□□□ 1.15
PER3P56645 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PER3P56645 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PER3P56645 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.21■■□□□ 1.15
PER3P56645 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PER3P56645 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.2■■□□□ 1.14
PER3P56645 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PER3P56645 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms