Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 ATG16YMR159C 453 nt8.11□□□□□ -1.11
TY1A-JR2P47099 MTF1YMR228W 1026 nt8.11□□□□□ -1.11
TY1A-JR2P47099 YPR145C-AYPR145C-A 237 nt8.11□□□□□ -1.11
TY1A-JR2P47099 DFG5YMR238W 1377 nt8.1□□□□□ -1.11
TY1A-JR2P47099 PDS1YDR113C 1122 nt8.1□□□□□ -1.11
TY1A-JR2P47099 RNH202YDR279W 1053 nt8.1□□□□□ -1.11
TY1A-JR2P47099 YHL046W-AYHL046W-A 327 nt8.1□□□□□ -1.11
TY1A-JR2P47099 YHR212W-AYHR212W-A 204 nt8.1□□□□□ -1.11
TY1A-JR2P47099 BDH1YAL060W 1149 nt8.1□□□□□ -1.11
TY1A-JR2P47099 NYV1YLR093C 762 nt8.1□□□□□ -1.11
TY1A-JR2P47099 YLR123CYLR123C 330 nt8.1□□□□□ -1.11
TY1A-JR2P47099 YAR061WYAR061W 204 nt8.1□□□□□ -1.11
TY1A-JR2P47099 MFT1YML062C 1179 nt8.1□□□□□ -1.11
TY1A-JR2P47099 CAF40YNL288W 1122 nt8.1□□□□□ -1.11
TY1A-JR2P47099 YPL034WYPL034W 498 nt8.1□□□□□ -1.11
TY1A-JR2P47099 SHM1YBR263W 1473 nt8.1□□□□□ -1.11
TY1A-JR2P47099 ALD5YER073W 1563 nt8.1□□□□□ -1.11
TY1A-JR2P47099 SNU23YDL098C 585 nt8.09□□□□□ -1.11
TY1A-JR2P47099 TIF2YJL138C 1188 nt8.09□□□□□ -1.11
TY1A-JR2P47099 PRP21YJL203W 843 nt8.09□□□□□ -1.11
TY1A-JR2P47099 TIF1YKR059W 1188 nt8.09□□□□□ -1.11
TY1A-JR2P47099 RNP1YLL046C 750 nt8.09□□□□□ -1.11
TY1A-JR2P47099 HST1YOL068C 1512 nt8.08□□□□□ -1.12
TY1A-JR2P47099 SSN3YPL042C 1668 nt8.08□□□□□ -1.12
TY1A-JR2P47099 YNR066CYNR066C 1311 nt8.08□□□□□ -1.12
TY1A-JR2P47099 HXK1YFR053C 1458 nt8.08□□□□□ -1.12
TY1A-JR2P47099 GSP2YOR185C 663 nt8.08□□□□□ -1.12
TY1A-JR2P47099 YPL261CYPL261C 309 nt8.08□□□□□ -1.12
TY1A-JR2P47099 CCL1YPR025C 1182 nt8.08□□□□□ -1.12
TY1A-JR2P47099 GCD11YER025W 1584 nt8.08□□□□□ -1.12
TY1A-JR2P47099 SPS22YCL048W 1392 nt8.08□□□□□ -1.12
TY1A-JR2P47099 YDL124WYDL124W 939 nt8.07□□□□□ -1.12
TY1A-JR2P47099 SPR28YDR218C 1272 nt8.07□□□□□ -1.12
TY1A-JR2P47099 RTR1YER139C 681 nt8.07□□□□□ -1.12
TY1A-JR2P47099 DMC1YER179W 1005 nt8.07□□□□□ -1.12
TY1A-JR2P47099 SHH4YLR164W 507 nt8.07□□□□□ -1.12
TY1A-JR2P47099 SPC2YML055W 537 nt8.07□□□□□ -1.12
TY1A-JR2P47099 PDR16YNL231C 1056 nt8.07□□□□□ -1.12
TY1A-JR2P47099 SUR1YPL057C 1149 nt8.07□□□□□ -1.12
TY1A-JR2P47099 YPR064WYPR064W 420 nt8.07□□□□□ -1.12
TY1A-JR2P47099 YPR109WYPR109W 885 nt8.07□□□□□ -1.12
TY1A-JR2P47099 THI72YOR192C 1800 nt8.07□□□□□ -1.12
TY1A-JR2P47099 HXT1YHR094C 1713 nt8.06□□□□□ -1.12
TY1A-JR2P47099 YFR020WYFR020W 699 nt8.06□□□□□ -1.12
TY1A-JR2P47099 MPO1YGL010W 525 nt8.06□□□□□ -1.12
TY1A-JR2P47099 HAP2YGL237C 798 nt8.06□□□□□ -1.12
TY1A-JR2P47099 UBX6YJL048C 1191 nt8.06□□□□□ -1.12
TY1A-JR2P47099 ALB1YJL122W 528 nt8.06□□□□□ -1.12
TY1A-JR2P47099 NSE1YLR007W 1011 nt8.06□□□□□ -1.12
TY1A-JR2P47099 SAS2YMR127C 1017 nt8.06□□□□□ -1.12
TY1A-JR2P47099 CYT1YOR065W 930 nt8.06□□□□□ -1.12
TY1A-JR2P47099 YBR053CYBR053C 1077 nt8.06□□□□□ -1.12
TY1A-JR2P47099 ODC1YPL134C 933 nt8.06□□□□□ -1.12
TY1A-JR2P47099 STE50YCL032W 1041 nt8.06□□□□□ -1.12
TY1A-JR2P47099 VRP1YLR337C 2454 nt8.05□□□□□ -1.12
TY1A-JR2P47099 SLU7YDR088C 1149 nt8.05□□□□□ -1.12
TY1A-JR2P47099 LSM4YER112W 564 nt8.05□□□□□ -1.12
TY1A-JR2P47099 PEX14YGL153W 1026 nt8.05□□□□□ -1.12
TY1A-JR2P47099 YIP5YGL161C 933 nt8.05□□□□□ -1.12
TY1A-JR2P47099 YGL230CYGL230C 444 nt8.05□□□□□ -1.12
TY1A-JR2P47099 PRP38YGR075C 729 nt8.05□□□□□ -1.12
TY1A-JR2P47099 BTN2YGR142W 1233 nt8.05□□□□□ -1.12
TY1A-JR2P47099 SAM35YHR083W 990 nt8.05□□□□□ -1.12
TY1A-JR2P47099 GPN3YLR243W 819 nt8.05□□□□□ -1.12
TY1A-JR2P47099 TAD3YLR316C 969 nt8.05□□□□□ -1.12
TY1A-JR2P47099 TOM40YMR203W 1164 nt8.05□□□□□ -1.12
TY1A-JR2P47099 YPL191CYPL191C 1083 nt8.05□□□□□ -1.12
TY1A-JR2P47099 IPL1YPL209C 1104 nt8.05□□□□□ -1.12
TY1A-JR2P47099 CKS1YBR135W 453 nt8.05□□□□□ -1.12
TY1A-JR2P47099 RAD59YDL059C 717 nt8.04□□□□□ -1.12
TY1A-JR2P47099 RCR2YDR003W 633 nt8.04□□□□□ -1.12
TY1A-JR2P47099 YJL171CYJL171C 1191 nt8.04□□□□□ -1.12
TY1A-JR2P47099 SRP102YKL154W 735 nt8.04□□□□□ -1.12
TY1A-JR2P47099 RRT7YLL030C 342 nt8.04□□□□□ -1.12
TY1A-JR2P47099 NRK1YNL129W 723 nt8.04□□□□□ -1.12
TY1A-JR2P47099 YOR342CYOR342C 960 nt8.04□□□□□ -1.12
TY1A-JR2P47099 FDH1YOR388C 1131 nt8.04□□□□□ -1.12
TY1A-JR2P47099 SPP1YPL138C 1062 nt8.04□□□□□ -1.12
TY1A-JR2P47099 TUB4YLR212C 1422 nt8.03□□□□□ -1.12
TY1A-JR2P47099 YDR514CYDR514C 1452 nt8.03□□□□□ -1.12
TY1A-JR2P47099 RPT3YDR394W 1287 nt8.03□□□□□ -1.12
TY1A-JR2P47099 YGL138CYGL138C 1038 nt8.03□□□□□ -1.12
TY1A-JR2P47099 COS8YHL048W 1146 nt8.03□□□□□ -1.12
TY1A-JR2P47099 PSR1YLL010C 1284 nt8.03□□□□□ -1.12
TY1A-JR2P47099 ECM13YBL043W 774 nt8.03□□□□□ -1.12
TY1A-JR2P47099 LTO1YNL260C 597 nt8.03□□□□□ -1.12
TY1A-JR2P47099 MGE1YOR232W 687 nt8.03□□□□□ -1.12
TY1A-JR2P47099 YPR012WYPR012W 255 nt8.03□□□□□ -1.12
TY1A-JR2P47099 MUD1YBR119W 897 nt8.03□□□□□ -1.12
TY1A-JR2P47099 PRP19YLL036C 1512 nt8.03□□□□□ -1.12
TY1A-JR2P47099 SSL2YIL143C 2532 nt8.02□□□□□ -1.12
TY1A-JR2P47099 ELO2YCR034W 1044 nt8.02□□□□□ -1.13
TY1A-JR2P47099 RMD1YDL001W 1293 nt8.02□□□□□ -1.13
TY1A-JR2P47099 OCA6YDR067C 675 nt8.02□□□□□ -1.13
TY1A-JR2P47099 YDR278CYDR278C 318 nt8.02□□□□□ -1.13
TY1A-JR2P47099 PRO1YDR300C 1287 nt8.02□□□□□ -1.13
TY1A-JR2P47099 PSF2YJL072C 642 nt8.02□□□□□ -1.13
TY1A-JR2P47099 YLR049CYLR049C 1287 nt8.02□□□□□ -1.13
TY1A-JR2P47099 ASP3-1YLR155C 1089 nt8.02□□□□□ -1.13
TY1A-JR2P47099 ASP3-2YLR157C 1089 nt8.02□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 65.1 ms