Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 tL(UAA)B2tL(UAA)B2 84 nt5.83□□□□□ -1.48
LSM1P47017 tL(UAA)DtL(UAA)D 84 nt5.83□□□□□ -1.48
LSM1P47017 SUP51tL(UAA)J 84 nt5.83□□□□□ -1.48
LSM1P47017 tL(UAA)KtL(UAA)K 84 nt5.83□□□□□ -1.48
LSM1P47017 tL(UAA)LtL(UAA)L 84 nt5.83□□□□□ -1.48
LSM1P47017 tL(UAA)NtL(UAA)N 84 nt5.83□□□□□ -1.48
LSM1P47017 MRP51YPL118W 1035 nt5.83□□□□□ -1.48
LSM1P47017 YPR130CYPR130C 408 nt5.83□□□□□ -1.48
LSM1P47017 MIP1YOR330C 3765 nt5.83□□□□□ -1.48
LSM1P47017 IVY1YDR229W 1362 nt5.82□□□□□ -1.48
LSM1P47017 CIA1YDR267C 993 nt5.82□□□□□ -1.48
LSM1P47017 PSR2YLR019W 1194 nt5.82□□□□□ -1.48
LSM1P47017 ICT1YLR099C 1185 nt5.82□□□□□ -1.48
LSM1P47017 MSN2YMR037C 2115 nt5.82□□□□□ -1.48
LSM1P47017 YBR113WYBR113W 483 nt5.82□□□□□ -1.48
LSM1P47017 JIP4YDR475C 2631 nt5.82□□□□□ -1.48
LSM1P47017 ASN1YPR145W 1719 nt5.82□□□□□ -1.48
LSM1P47017 STB5YHR178W 2232 nt5.82□□□□□ -1.48
LSM1P47017 POX1YGL205W 2247 nt5.81□□□□□ -1.48
LSM1P47017 CDC11YJR076C 1248 nt5.81□□□□□ -1.48
LSM1P47017 CWC27YPL064C 906 nt5.81□□□□□ -1.48
LSM1P47017 SMX3YPR182W 261 nt5.81□□□□□ -1.48
LSM1P47017 GPB2YAL056W 2643 nt5.81□□□□□ -1.48
LSM1P47017 GAA1YLR088W 1845 nt5.81□□□□□ -1.48
LSM1P47017 TKL1YPR074C 2043 nt5.81□□□□□ -1.48
LSM1P47017 XBP1YIL101C 1944 nt5.8□□□□□ -1.48
LSM1P47017 CLB2YPR119W 1476 nt5.8□□□□□ -1.48
LSM1P47017 MRPL1YDR116C 858 nt5.8□□□□□ -1.48
LSM1P47017 YGL102CYGL102C 429 nt5.8□□□□□ -1.48
LSM1P47017 RPP1YHR062C 882 nt5.8□□□□□ -1.48
LSM1P47017 FBA1YKL060C 1080 nt5.8□□□□□ -1.48
LSM1P47017 RHO4YKR055W 876 nt5.8□□□□□ -1.48
LSM1P47017 KSH1YNL024C-A 219 nt5.8□□□□□ -1.48
LSM1P47017 MRPL19YNL185C 477 nt5.8□□□□□ -1.48
LSM1P47017 TMA46YOR091W 1038 nt5.8□□□□□ -1.48
LSM1P47017 YBR226CYBR226C 411 nt5.8□□□□□ -1.48
LSM1P47017 VPS61YDR136C 573 nt5.79□□□□□ -1.48
LSM1P47017 TRR2YHR106W 1029 nt5.79□□□□□ -1.48
LSM1P47017 ARA2YMR041C 1008 nt5.79□□□□□ -1.48
LSM1P47017 YOL036WYOL036W 2286 nt5.79□□□□□ -1.48
LSM1P47017 LAT1YNL071W 1449 nt5.79□□□□□ -1.48
LSM1P47017 PFK2YMR205C 2880 nt5.78□□□□□ -1.48
LSM1P47017 CCC2YDR270W 3015 nt5.78□□□□□ -1.48
LSM1P47017 TEL2YGR099W 2067 nt5.78□□□□□ -1.48
LSM1P47017 TIM22YDL217C 624 nt5.78□□□□□ -1.48
LSM1P47017 HED1YDR014W-A 489 nt5.78□□□□□ -1.48
LSM1P47017 MRPS28YDR337W 861 nt5.78□□□□□ -1.48
LSM1P47017 DMA1YHR115C 1251 nt5.78□□□□□ -1.48
LSM1P47017 MIA40YKL195W 1212 nt5.78□□□□□ -1.48
LSM1P47017 GEP5YLR091W 882 nt5.78□□□□□ -1.48
LSM1P47017 RDL2YOR286W 450 nt5.78□□□□□ -1.48
LSM1P47017 THI2YBR240C 1353 nt5.78□□□□□ -1.48
LSM1P47017 GUF1YLR289W 1938 nt5.78□□□□□ -1.48
LSM1P47017 CIT3YPR001W 1461 nt5.77□□□□□ -1.49
LSM1P47017 PAB1YER165W 1734 nt5.77□□□□□ -1.49
LSM1P47017 SCT1YBL011W 2280 nt5.77□□□□□ -1.49
LSM1P47017 PRS4YBL068W 981 nt5.77□□□□□ -1.49
LSM1P47017 CPA1YOR303W 1236 nt5.77□□□□□ -1.49
LSM1P47017 YPL250W-AYPL250W-A 288 nt5.77□□□□□ -1.49
LSM1P47017 HSP104YLL026W 2727 nt5.77□□□□□ -1.49
LSM1P47017 PAP2YOL115W 1755 nt5.77□□□□□ -1.49
LSM1P47017 VPS5YOR069W 2028 nt5.77□□□□□ -1.49
LSM1P47017 YLL056CYLL056C 897 nt5.76□□□□□ -1.49
LSM1P47017 MRPS12YNR036C 462 nt5.76□□□□□ -1.49
LSM1P47017 YFL052WYFL052W 1398 nt5.76□□□□□ -1.49
LSM1P47017 APE4YHR113W 1473 nt5.76□□□□□ -1.49
LSM1P47017 STT3YGL022W 2157 nt5.76□□□□□ -1.49
LSM1P47017 CRZ1YNL027W 2037 nt5.75□□□□□ -1.49
LSM1P47017 MCM6YGL201C 3054 nt5.75□□□□□ -1.49
LSM1P47017 SOD2YHR008C 702 nt5.75□□□□□ -1.49
LSM1P47017 PRI1YIR008C 1230 nt5.75□□□□□ -1.49
LSM1P47017 SQT1YIR012W 1296 nt5.75□□□□□ -1.49
LSM1P47017 YPL067CYPL067C 597 nt5.75□□□□□ -1.49
LSM1P47017 GPT2YKR067W 2232 nt5.74□□□□□ -1.49
LSM1P47017 SPG1YGR236C 288 nt5.74□□□□□ -1.49
LSM1P47017 SWD1YAR003W 1281 nt5.74□□□□□ -1.49
LSM1P47017 PTK2YJR059W 2457 nt5.74□□□□□ -1.49
LSM1P47017 ALD6YPL061W 1503 nt5.74□□□□□ -1.49
LSM1P47017 FAT3YKL187C 2253 nt5.73□□□□□ -1.49
LSM1P47017 AMA1YGR225W 1782 nt5.73□□□□□ -1.49
LSM1P47017 CHL4YDR254W 1377 nt5.73□□□□□ -1.49
LSM1P47017 GPA2YER020W 1350 nt5.73□□□□□ -1.49
LSM1P47017 YKL018C-AYKL018C-A 300 nt5.73□□□□□ -1.49
LSM1P47017 YLR123CYLR123C 330 nt5.73□□□□□ -1.49
LSM1P47017 YPR123CYPR123C 435 nt5.73□□□□□ -1.49
LSM1P47017 GEX1YCL073C 1848 nt5.73□□□□□ -1.49
LSM1P47017 GEX2YKR106W 1848 nt5.73□□□□□ -1.49
LSM1P47017 COQ1YBR003W 1422 nt5.73□□□□□ -1.49
LSM1P47017 PEX3YDR329C 1326 nt5.73□□□□□ -1.49
LSM1P47017 SPS22YCL048W 1392 nt5.72□□□□□ -1.49
LSM1P47017 PTH2YBL057C 627 nt5.72□□□□□ -1.49
LSM1P47017 RFC4YOL094C 972 nt5.72□□□□□ -1.49
LSM1P47017 DFR1YOR236W 636 nt5.72□□□□□ -1.49
LSM1P47017 COX10YPL172C 1389 nt5.71□□□□□ -1.5
LSM1P47017 PAU21YOR394W 495 nt5.71□□□□□ -1.5
LSM1P47017 PAU22YPL282C 495 nt5.71□□□□□ -1.5
LSM1P47017 YCL049CYCL049C 939 nt5.71□□□□□ -1.5
LSM1P47017 CMR1YDL156W 1569 nt5.71□□□□□ -1.5
LSM1P47017 SET5YHR207C 1581 nt5.71□□□□□ -1.5
LSM1P47017 PRP24YMR268C 1335 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms