Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ACKR3P25106 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.08■□□□□ 0.97
ACKR3P25106 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ACKR3P25106 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ACKR3P25106 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ACKR3P25106 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ACKR3P25106 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ACKR3P25106 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACKR3P25106 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACKR3P25106 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.07■□□□□ 0.96
ACKR3P25106 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ACKR3P25106 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACKR3P25106 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACKR3P25106 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ACKR3P25106 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.06■□□□□ 0.96
ACKR3P25106 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.06■□□□□ 0.96
ACKR3P25106 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.06■□□□□ 0.96
ACKR3P25106 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
ACKR3P25106 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACKR3P25106 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.05■□□□□ 0.96
ACKR3P25106 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACKR3P25106 AL359504.2-201ENST00000605506 1601 ntBASIC21.05■□□□□ 0.96
ACKR3P25106 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACKR3P25106 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ACKR3P25106 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.05■□□□□ 0.96
ACKR3P25106 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ACKR3P25106 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACKR3P25106 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACKR3P25106 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACKR3P25106 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.04■□□□□ 0.96
ACKR3P25106 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACKR3P25106 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ACKR3P25106 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACKR3P25106 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACKR3P25106 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.03■□□□□ 0.96
ACKR3P25106 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACKR3P25106 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ACKR3P25106 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACKR3P25106 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.02■□□□□ 0.96
ACKR3P25106 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACKR3P25106 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACKR3P25106 ERN1-208ENST00000606895 2068 ntBASIC21.02■□□□□ 0.96
ACKR3P25106 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACKR3P25106 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ACKR3P25106 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ACKR3P25106 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACKR3P25106 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.01■□□□□ 0.95
ACKR3P25106 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.01■□□□□ 0.95
ACKR3P25106 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.01■□□□□ 0.95
ACKR3P25106 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACKR3P25106 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.01■□□□□ 0.95
ACKR3P25106 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACKR3P25106 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACKR3P25106 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACKR3P25106 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACKR3P25106 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACKR3P25106 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
ACKR3P25106 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ACKR3P25106 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACKR3P25106 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACKR3P25106 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21■□□□□ 0.95
ACKR3P25106 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACKR3P25106 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACKR3P25106 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ACKR3P25106 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ACKR3P25106 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ACKR3P25106 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.99■□□□□ 0.95
ACKR3P25106 AC126177.7-201ENST00000547904 679 ntBASIC20.99■□□□□ 0.95
ACKR3P25106 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ACKR3P25106 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACKR3P25106 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ACKR3P25106 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACKR3P25106 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACKR3P25106 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACKR3P25106 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACKR3P25106 MIR639-201ENST00000384974 98 ntBASIC20.98■□□□□ 0.95
ACKR3P25106 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACKR3P25106 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.98■□□□□ 0.95
ACKR3P25106 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACKR3P25106 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACKR3P25106 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACKR3P25106 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.97■□□□□ 0.95
ACKR3P25106 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACKR3P25106 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.97■□□□□ 0.95
ACKR3P25106 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACKR3P25106 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
ACKR3P25106 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACKR3P25106 AC020928.2-201ENST00000588717 2197 ntBASIC20.96■□□□□ 0.95
ACKR3P25106 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.96■□□□□ 0.95
ACKR3P25106 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACKR3P25106 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACKR3P25106 AC010501.1-201ENST00000606270 1962 ntBASIC20.96■□□□□ 0.95
ACKR3P25106 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ACKR3P25106 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ACKR3P25106 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ACKR3P25106 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.95■□□□□ 0.94
ACKR3P25106 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ACKR3P25106 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACKR3P25106 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 1561.8 ms