Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL5A1P20908 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL5A1P20908 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL5A1P20908 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
COL5A1P20908 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL5A1P20908 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A1P20908 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.82■■□□□ 1.4
COL5A1P20908 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.82■■□□□ 1.4
COL5A1P20908 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A1P20908 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A1P20908 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A1P20908 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A1P20908 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A1P20908 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A1P20908 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL5A1P20908 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.82■■□□□ 1.4
COL5A1P20908 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.82■■□□□ 1.4
COL5A1P20908 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
COL5A1P20908 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
COL5A1P20908 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A1P20908 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL5A1P20908 Z92544.1-202ENST00000571933 1220 ntBASIC23.81■■□□□ 1.4
COL5A1P20908 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
COL5A1P20908 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A1P20908 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL5A1P20908 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.8■■□□□ 1.4
COL5A1P20908 AC087393.1-201ENST00000582896 145 ntBASIC23.8■■□□□ 1.4
COL5A1P20908 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.8■■□□□ 1.4
COL5A1P20908 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
COL5A1P20908 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.79■■□□□ 1.4
COL5A1P20908 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.79■■□□□ 1.4
COL5A1P20908 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A1P20908 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A1P20908 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL5A1P20908 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A1P20908 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.78■■□□□ 1.4
COL5A1P20908 AL356441.2-201ENST00000443009 864 ntBASIC23.78■■□□□ 1.4
COL5A1P20908 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL5A1P20908 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.78■■□□□ 1.4
COL5A1P20908 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
COL5A1P20908 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A1P20908 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.77■■□□□ 1.4
COL5A1P20908 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A1P20908 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL5A1P20908 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.77■■□□□ 1.4
COL5A1P20908 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A1P20908 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL5A1P20908 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.76■■□□□ 1.39
COL5A1P20908 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.76■■□□□ 1.39
COL5A1P20908 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.76■■□□□ 1.39
COL5A1P20908 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.75■■□□□ 1.39
COL5A1P20908 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.75■■□□□ 1.39
COL5A1P20908 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
COL5A1P20908 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.75■■□□□ 1.39
COL5A1P20908 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A1P20908 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A1P20908 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.75■■□□□ 1.39
COL5A1P20908 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A1P20908 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.75■■□□□ 1.39
COL5A1P20908 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
COL5A1P20908 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL5A1P20908 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.75■■□□□ 1.39
COL5A1P20908 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A1P20908 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
COL5A1P20908 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.74■■□□□ 1.39
COL5A1P20908 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL5A1P20908 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
COL5A1P20908 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.74■■□□□ 1.39
COL5A1P20908 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.73■■□□□ 1.39
COL5A1P20908 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.73■■□□□ 1.39
COL5A1P20908 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A1P20908 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL5A1P20908 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.73■■□□□ 1.39
COL5A1P20908 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
COL5A1P20908 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.73■■□□□ 1.39
COL5A1P20908 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.72■■□□□ 1.39
COL5A1P20908 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL5A1P20908 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.72■■□□□ 1.39
COL5A1P20908 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.72■■□□□ 1.39
COL5A1P20908 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
COL5A1P20908 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.71■■□□□ 1.39
COL5A1P20908 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.39
COL5A1P20908 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL5A1P20908 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL5A1P20908 DRD5P2-201ENST00000421395 2012 ntBASIC23.7■■□□□ 1.38
COL5A1P20908 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL5A1P20908 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL5A1P20908 RPS2P7-201ENST00000447334 885 ntBASIC23.7■■□□□ 1.38
COL5A1P20908 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.7■■□□□ 1.38
COL5A1P20908 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL5A1P20908 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
COL5A1P20908 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.69■■□□□ 1.38
COL5A1P20908 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.69■■□□□ 1.38
COL5A1P20908 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A1P20908 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A1P20908 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
COL5A1P20908 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A1P20908 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL5A1P20908 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
COL5A1P20908 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms