Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.29■■□□□ 1.32
BCKDHAP12694 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHAP12694 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.29■■□□□ 1.32
BCKDHAP12694 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHAP12694 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHAP12694 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHAP12694 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHAP12694 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHAP12694 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHAP12694 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHAP12694 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHAP12694 CR559946.2-201ENST00000623684 991 ntBASIC23.27■■□□□ 1.32
BCKDHAP12694 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
BCKDHAP12694 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHAP12694 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
BCKDHAP12694 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BCKDHAP12694 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
BCKDHAP12694 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.26■■□□□ 1.31
BCKDHAP12694 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BCKDHAP12694 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.26■■□□□ 1.31
BCKDHAP12694 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BCKDHAP12694 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.25■■□□□ 1.31
BCKDHAP12694 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BCKDHAP12694 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
BCKDHAP12694 ABHD17AP4-201ENST00000411545 909 ntBASIC23.25■■□□□ 1.31
BCKDHAP12694 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BCKDHAP12694 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
BCKDHAP12694 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.24■■□□□ 1.31
BCKDHAP12694 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BCKDHAP12694 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.24■■□□□ 1.31
BCKDHAP12694 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BCKDHAP12694 AL359504.2-201ENST00000605506 1601 ntBASIC23.23■■□□□ 1.31
BCKDHAP12694 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BCKDHAP12694 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.23■■□□□ 1.31
BCKDHAP12694 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHAP12694 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHAP12694 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
BCKDHAP12694 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.22■■□□□ 1.31
BCKDHAP12694 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.22■■□□□ 1.31
BCKDHAP12694 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
BCKDHAP12694 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
BCKDHAP12694 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHAP12694 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
BCKDHAP12694 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
BCKDHAP12694 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
BCKDHAP12694 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.21■■□□□ 1.31
BCKDHAP12694 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.2■■□□□ 1.31
BCKDHAP12694 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BCKDHAP12694 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.2■■□□□ 1.3
BCKDHAP12694 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BCKDHAP12694 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BCKDHAP12694 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCKDHAP12694 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCKDHAP12694 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BCKDHAP12694 MIR3648-2-201ENST00000581792 180 ntBASIC23.19■■□□□ 1.3
BCKDHAP12694 MIR3648-1-201ENST00000615959 180 ntBASIC23.19■■□□□ 1.3
BCKDHAP12694 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
BCKDHAP12694 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
BCKDHAP12694 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.18■■□□□ 1.3
BCKDHAP12694 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
BCKDHAP12694 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
BCKDHAP12694 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
BCKDHAP12694 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BCKDHAP12694 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCKDHAP12694 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.17■■□□□ 1.3
BCKDHAP12694 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCKDHAP12694 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCKDHAP12694 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BCKDHAP12694 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
BCKDHAP12694 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BCKDHAP12694 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.16■■□□□ 1.3
BCKDHAP12694 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.16■■□□□ 1.3
BCKDHAP12694 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
BCKDHAP12694 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
BCKDHAP12694 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.15■■□□□ 1.3
BCKDHAP12694 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
BCKDHAP12694 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.14■■□□□ 1.3
BCKDHAP12694 AC096887.2-201ENST00000623443 1957 ntBASIC23.14■■□□□ 1.3
BCKDHAP12694 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
BCKDHAP12694 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
BCKDHAP12694 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
BCKDHAP12694 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BCKDHAP12694 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BCKDHAP12694 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
BCKDHAP12694 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BCKDHAP12694 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
BCKDHAP12694 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BCKDHAP12694 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BCKDHAP12694 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
BCKDHAP12694 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
BCKDHAP12694 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.12■■□□□ 1.29
BCKDHAP12694 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
BCKDHAP12694 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BCKDHAP12694 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
BCKDHAP12694 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BCKDHAP12694 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms