Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLUP10909 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLUP10909 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.83■■□□□ 1.09
CLUP10909 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLUP10909 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
CLUP10909 AC010501.1-201ENST00000606270 1962 ntBASIC21.83■■□□□ 1.08
CLUP10909 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLUP10909 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.82■■□□□ 1.08
CLUP10909 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CLUP10909 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLUP10909 DUX4L13-201ENST00000554103 1267 ntBASIC21.82■■□□□ 1.08
CLUP10909 DUX4L15-201ENST00000611059 1267 ntBASIC21.82■■□□□ 1.08
CLUP10909 DUX4L23-201ENST00000615195 1269 ntBASIC21.82■■□□□ 1.08
CLUP10909 DUX4L24-201ENST00000617576 1269 ntBASIC21.82■■□□□ 1.08
CLUP10909 DUX4L22-201ENST00000618238 1269 ntBASIC21.82■■□□□ 1.08
CLUP10909 DUX4L20-201ENST00000619712 1269 ntBASIC21.82■■□□□ 1.08
CLUP10909 DUX4L21-201ENST00000622058 1269 ntBASIC21.82■■□□□ 1.08
CLUP10909 DUX4L10-201ENST00000622460 1267 ntBASIC21.82■■□□□ 1.08
CLUP10909 DUX4L25-201ENST00000624915 1269 ntBASIC21.82■■□□□ 1.08
CLUP10909 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLUP10909 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CLUP10909 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CLUP10909 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.81■■□□□ 1.08
CLUP10909 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLUP10909 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CLUP10909 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLUP10909 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLUP10909 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CLUP10909 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLUP10909 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.8■■□□□ 1.08
CLUP10909 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLUP10909 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CLUP10909 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLUP10909 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLUP10909 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLUP10909 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLUP10909 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLUP10909 MIR219A2-201ENST00000608502 1504 ntBASIC21.79■■□□□ 1.08
CLUP10909 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.78■■□□□ 1.08
CLUP10909 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLUP10909 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLUP10909 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.78■■□□□ 1.08
CLUP10909 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.78■■□□□ 1.08
CLUP10909 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.78■■□□□ 1.08
CLUP10909 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CLUP10909 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.78■■□□□ 1.08
CLUP10909 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLUP10909 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CLUP10909 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLUP10909 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLUP10909 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.76■■□□□ 1.07
CLUP10909 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.76■■□□□ 1.07
CLUP10909 DUX4L11-201ENST00000611504 1267 ntBASIC21.76■■□□□ 1.07
CLUP10909 DUX4L12-201ENST00000614593 1267 ntBASIC21.76■■□□□ 1.07
CLUP10909 DUX4L14-201ENST00000621227 1267 ntBASIC21.76■■□□□ 1.07
CLUP10909 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLUP10909 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLUP10909 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLUP10909 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLUP10909 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLUP10909 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLUP10909 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLUP10909 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLUP10909 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLUP10909 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLUP10909 AC008813.1-201ENST00000536597 885 ntBASIC21.73■■□□□ 1.07
CLUP10909 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.73■■□□□ 1.07
CLUP10909 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLUP10909 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLUP10909 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLUP10909 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLUP10909 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLUP10909 HLA-V-202ENST00000446817 847 ntBASIC21.72■■□□□ 1.07
CLUP10909 AC148477.6-201ENST00000623746 465 ntBASIC21.72■■□□□ 1.07
CLUP10909 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLUP10909 AC093323.1-202ENST00000635031 2045 ntBASIC21.72■■□□□ 1.07
CLUP10909 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.72■■□□□ 1.07
CLUP10909 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLUP10909 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLUP10909 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLUP10909 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLUP10909 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.71■■□□□ 1.07
CLUP10909 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.71■■□□□ 1.07
CLUP10909 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.07
CLUP10909 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLUP10909 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLUP10909 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLUP10909 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CLUP10909 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.69■■□□□ 1.06
CLUP10909 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms