Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 GPX1-201ENST00000419349 1106 ntBASIC26.82■■□□□ 1.88
UBE4BO95155 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
UBE4BO95155 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
UBE4BO95155 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.81■■□□□ 1.88
UBE4BO95155 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.81■■□□□ 1.88
UBE4BO95155 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.81■■□□□ 1.88
UBE4BO95155 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.81■■□□□ 1.88
UBE4BO95155 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
UBE4BO95155 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
UBE4BO95155 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.8■■□□□ 1.88
UBE4BO95155 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.8■■□□□ 1.88
UBE4BO95155 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
UBE4BO95155 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
UBE4BO95155 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
UBE4BO95155 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
UBE4BO95155 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.79■■□□□ 1.88
UBE4BO95155 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
UBE4BO95155 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
UBE4BO95155 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
UBE4BO95155 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
UBE4BO95155 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.78■■□□□ 1.88
UBE4BO95155 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.78■■□□□ 1.88
UBE4BO95155 MIR3960-201ENST00000583311 91 ntBASIC26.78■■□□□ 1.88
UBE4BO95155 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.78■■□□□ 1.88
UBE4BO95155 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBE4BO95155 AC145676.1-201ENST00000514988 2004 ntBASIC26.77■■□□□ 1.88
UBE4BO95155 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
UBE4BO95155 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
UBE4BO95155 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.77■■□□□ 1.88
UBE4BO95155 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBE4BO95155 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBE4BO95155 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
UBE4BO95155 SMPD5-203ENST00000639008 1464 ntBASIC26.77■■□□□ 1.88
UBE4BO95155 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
UBE4BO95155 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.76■■□□□ 1.87
UBE4BO95155 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBE4BO95155 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
UBE4BO95155 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.76■■□□□ 1.87
UBE4BO95155 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
UBE4BO95155 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
UBE4BO95155 DUSP8P4-201ENST00000399538 1761 ntBASIC26.76■■□□□ 1.87
UBE4BO95155 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
UBE4BO95155 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
UBE4BO95155 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.75■■□□□ 1.87
UBE4BO95155 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.75■■□□□ 1.87
UBE4BO95155 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
UBE4BO95155 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.74■■□□□ 1.87
UBE4BO95155 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
UBE4BO95155 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.74■■□□□ 1.87
UBE4BO95155 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.73■■□□□ 1.87
UBE4BO95155 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
UBE4BO95155 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
UBE4BO95155 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
UBE4BO95155 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
UBE4BO95155 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.72■■□□□ 1.87
UBE4BO95155 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
UBE4BO95155 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
UBE4BO95155 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.71■■□□□ 1.87
UBE4BO95155 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
UBE4BO95155 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.7■■□□□ 1.87
UBE4BO95155 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
UBE4BO95155 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.7■■□□□ 1.87
UBE4BO95155 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.86
UBE4BO95155 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.7■■□□□ 1.86
UBE4BO95155 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.69■■□□□ 1.86
UBE4BO95155 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.69■■□□□ 1.86
UBE4BO95155 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.69■■□□□ 1.86
UBE4BO95155 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
UBE4BO95155 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.68■■□□□ 1.86
UBE4BO95155 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.68■■□□□ 1.86
UBE4BO95155 AC007029.1-201ENST00000604183 313 ntBASIC26.68■■□□□ 1.86
UBE4BO95155 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
UBE4BO95155 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
UBE4BO95155 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
UBE4BO95155 AC010501.1-201ENST00000606270 1962 ntBASIC26.67■■□□□ 1.86
UBE4BO95155 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
UBE4BO95155 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UBE4BO95155 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
UBE4BO95155 RP9P-202ENST00000450133 1212 ntBASIC26.66■■□□□ 1.86
UBE4BO95155 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UBE4BO95155 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UBE4BO95155 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
UBE4BO95155 RNF126P1-201ENST00000567452 1320 ntBASIC26.66■■□□□ 1.86
UBE4BO95155 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
UBE4BO95155 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
UBE4BO95155 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
UBE4BO95155 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE4BO95155 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.65■■□□□ 1.86
UBE4BO95155 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE4BO95155 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
UBE4BO95155 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE4BO95155 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
UBE4BO95155 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
UBE4BO95155 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.65■■□□□ 1.86
UBE4BO95155 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
UBE4BO95155 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
UBE4BO95155 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.64■■□□□ 1.85
UBE4BO95155 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
UBE4BO95155 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
UBE4BO95155 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms