Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZNF253O75346 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF253O75346 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF253O75346 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZNF253O75346 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.71■□□□□ 0.59
ZNF253O75346 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.71■□□□□ 0.59
ZNF253O75346 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF253O75346 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF253O75346 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF253O75346 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF253O75346 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF253O75346 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF253O75346 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF253O75346 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF253O75346 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF253O75346 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF253O75346 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF253O75346 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZNF253O75346 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF253O75346 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF253O75346 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF253O75346 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF253O75346 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF253O75346 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF253O75346 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF253O75346 AL162393.1-201ENST00000437852 946 ntBASIC18.69■□□□□ 0.58
ZNF253O75346 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF253O75346 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF253O75346 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF253O75346 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF253O75346 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ZNF253O75346 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF253O75346 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF253O75346 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF253O75346 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF253O75346 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF253O75346 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF253O75346 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF253O75346 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF253O75346 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF253O75346 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF253O75346 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF253O75346 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF253O75346 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF253O75346 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF253O75346 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF253O75346 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF253O75346 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF253O75346 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF253O75346 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF253O75346 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF253O75346 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF253O75346 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF253O75346 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF253O75346 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF253O75346 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF253O75346 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.64■□□□□ 0.58
ZNF253O75346 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ZNF253O75346 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF253O75346 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.64■□□□□ 0.57
ZNF253O75346 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF253O75346 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF253O75346 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF253O75346 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF253O75346 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF253O75346 DUX4L29-201ENST00000425409 679 ntBASIC18.63■□□□□ 0.57
ZNF253O75346 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF253O75346 AC021231.2-201ENST00000594613 730 ntBASIC18.63■□□□□ 0.57
ZNF253O75346 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF253O75346 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF253O75346 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF253O75346 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF253O75346 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF253O75346 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF253O75346 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
ZNF253O75346 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF253O75346 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF253O75346 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF253O75346 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF253O75346 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF253O75346 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZNF253O75346 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
ZNF253O75346 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF253O75346 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF253O75346 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms