Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.53■■□□□ 1.52
TCRBV9S1A1TA0A576 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TCRBV9S1A1TA0A576 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TCRBV9S1A1TA0A576 AC008813.1-201ENST00000536597 885 ntBASIC24.52■■□□□ 1.52
TCRBV9S1A1TA0A576 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.52■■□□□ 1.52
TCRBV9S1A1TA0A576 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.52■■□□□ 1.52
TCRBV9S1A1TA0A576 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TCRBV9S1A1TA0A576 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
TCRBV9S1A1TA0A576 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.51■■□□□ 1.51
TCRBV9S1A1TA0A576 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TCRBV9S1A1TA0A576 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TCRBV9S1A1TA0A576 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TCRBV9S1A1TA0A576 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TCRBV9S1A1TA0A576 RPS2P35-201ENST00000443417 897 ntBASIC24.5■■□□□ 1.51
TCRBV9S1A1TA0A576 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.5■■□□□ 1.51
TCRBV9S1A1TA0A576 AC148477.6-201ENST00000623746 465 ntBASIC24.5■■□□□ 1.51
TCRBV9S1A1TA0A576 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.49■■□□□ 1.51
TCRBV9S1A1TA0A576 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TCRBV9S1A1TA0A576 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
TCRBV9S1A1TA0A576 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
TCRBV9S1A1TA0A576 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
TCRBV9S1A1TA0A576 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TCRBV9S1A1TA0A576 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TCRBV9S1A1TA0A576 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TCRBV9S1A1TA0A576 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.47■■□□□ 1.51
TCRBV9S1A1TA0A576 AC096887.2-201ENST00000623443 1957 ntBASIC24.47■■□□□ 1.51
TCRBV9S1A1TA0A576 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TCRBV9S1A1TA0A576 DUX4L11-201ENST00000611504 1267 ntBASIC24.46■■□□□ 1.51
TCRBV9S1A1TA0A576 DUX4L12-201ENST00000614593 1267 ntBASIC24.46■■□□□ 1.51
TCRBV9S1A1TA0A576 DUX4L14-201ENST00000621227 1267 ntBASIC24.46■■□□□ 1.51
TCRBV9S1A1TA0A576 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TCRBV9S1A1TA0A576 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.45■■□□□ 1.5
TCRBV9S1A1TA0A576 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TCRBV9S1A1TA0A576 AC142381.3-201ENST00000568208 1670 ntBASIC24.44■■□□□ 1.5
TCRBV9S1A1TA0A576 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TCRBV9S1A1TA0A576 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
TCRBV9S1A1TA0A576 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TCRBV9S1A1TA0A576 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TCRBV9S1A1TA0A576 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TCRBV9S1A1TA0A576 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
TCRBV9S1A1TA0A576 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TCRBV9S1A1TA0A576 AC022211.4-201ENST00000625094 2161 ntBASIC24.41■■□□□ 1.5
TCRBV9S1A1TA0A576 AL359258.2-201ENST00000564063 1566 ntBASIC24.41■■□□□ 1.5
TCRBV9S1A1TA0A576 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TCRBV9S1A1TA0A576 HLA-V-202ENST00000446817 847 ntBASIC24.4■■□□□ 1.5
TCRBV9S1A1TA0A576 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TCRBV9S1A1TA0A576 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.4■■□□□ 1.5
TCRBV9S1A1TA0A576 AL359504.2-201ENST00000605506 1601 ntBASIC24.39■■□□□ 1.5
TCRBV9S1A1TA0A576 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TCRBV9S1A1TA0A576 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
TCRBV9S1A1TA0A576 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.39■■□□□ 1.49
TCRBV9S1A1TA0A576 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TCRBV9S1A1TA0A576 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.39■■□□□ 1.49
TCRBV9S1A1TA0A576 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.39■■□□□ 1.49
TCRBV9S1A1TA0A576 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TCRBV9S1A1TA0A576 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.38■■□□□ 1.49
TCRBV9S1A1TA0A576 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TCRBV9S1A1TA0A576 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.38■■□□□ 1.49
TCRBV9S1A1TA0A576 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TCRBV9S1A1TA0A576 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms