Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV21A0A0B4J279 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV21A0A0B4J279 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV21A0A0B4J279 AC008813.1-201ENST00000536597 885 ntBASIC18■□□□□ 0.47
TRAV21A0A0B4J279 LINC01971-201ENST00000617888 1048 ntBASIC18■□□□□ 0.47
TRAV21A0A0B4J279 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV21A0A0B4J279 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV21A0A0B4J279 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV21A0A0B4J279 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV21A0A0B4J279 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV21A0A0B4J279 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV21A0A0B4J279 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV21A0A0B4J279 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV21A0A0B4J279 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV21A0A0B4J279 ERN1-208ENST00000606895 2068 ntBASIC17.97■□□□□ 0.47
TRAV21A0A0B4J279 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV21A0A0B4J279 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV21A0A0B4J279 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV21A0A0B4J279 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV21A0A0B4J279 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV21A0A0B4J279 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV21A0A0B4J279 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L13-201ENST00000554103 1267 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L15-201ENST00000611059 1267 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L23-201ENST00000615195 1269 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L24-201ENST00000617576 1269 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L22-201ENST00000618238 1269 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L20-201ENST00000619712 1269 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L21-201ENST00000622058 1269 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L10-201ENST00000622460 1267 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 DUX4L25-201ENST00000624915 1269 ntBASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV21A0A0B4J279 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV21A0A0B4J279 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.94■□□□□ 0.46
TRAV21A0A0B4J279 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV21A0A0B4J279 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV21A0A0B4J279 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV21A0A0B4J279 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV21A0A0B4J279 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV21A0A0B4J279 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TRAV21A0A0B4J279 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV21A0A0B4J279 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV21A0A0B4J279 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TRAV21A0A0B4J279 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV21A0A0B4J279 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV21A0A0B4J279 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV21A0A0B4J279 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV21A0A0B4J279 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV21A0A0B4J279 AC148477.6-201ENST00000623746 465 ntBASIC17.92■□□□□ 0.46
TRAV21A0A0B4J279 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV21A0A0B4J279 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
TRAV21A0A0B4J279 MIR219A2-201ENST00000608502 1504 ntBASIC17.92■□□□□ 0.46
TRAV21A0A0B4J279 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV21A0A0B4J279 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV21A0A0B4J279 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV21A0A0B4J279 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV21A0A0B4J279 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV21A0A0B4J279 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV21A0A0B4J279 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV21A0A0B4J279 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV21A0A0B4J279 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV21A0A0B4J279 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV21A0A0B4J279 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV21A0A0B4J279 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV21A0A0B4J279 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV21A0A0B4J279 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV21A0A0B4J279 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV21A0A0B4J279 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV21A0A0B4J279 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV21A0A0B4J279 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRAV21A0A0B4J279 AC142381.3-201ENST00000568208 1670 ntBASIC17.89■□□□□ 0.45
TRAV21A0A0B4J279 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRAV21A0A0B4J279 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV21A0A0B4J279 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV21A0A0B4J279 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV21A0A0B4J279 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV21A0A0B4J279 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV21A0A0B4J279 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV21A0A0B4J279 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV21A0A0B4J279 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV21A0A0B4J279 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV21A0A0B4J279 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV21A0A0B4J279 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV21A0A0B4J279 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV21A0A0B4J279 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms