Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV34A0A0B4J273 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV34A0A0B4J273 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV34A0A0B4J273 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV34A0A0B4J273 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV34A0A0B4J273 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV34A0A0B4J273 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV34A0A0B4J273 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV34A0A0B4J273 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.63■□□□□ 0.57
TRAV34A0A0B4J273 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV34A0A0B4J273 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV34A0A0B4J273 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV34A0A0B4J273 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV34A0A0B4J273 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV34A0A0B4J273 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV34A0A0B4J273 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV34A0A0B4J273 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV34A0A0B4J273 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRAV34A0A0B4J273 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TRAV34A0A0B4J273 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV34A0A0B4J273 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV34A0A0B4J273 AC108673.1-201ENST00000510422 1159 ntBASIC18.6■□□□□ 0.57
TRAV34A0A0B4J273 MIR6090-201ENST00000622481 60 ntBASIC18.6■□□□□ 0.57
TRAV34A0A0B4J273 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV34A0A0B4J273 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV34A0A0B4J273 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV34A0A0B4J273 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV34A0A0B4J273 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV34A0A0B4J273 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV34A0A0B4J273 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TRAV34A0A0B4J273 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV34A0A0B4J273 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV34A0A0B4J273 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV34A0A0B4J273 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV34A0A0B4J273 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV34A0A0B4J273 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV34A0A0B4J273 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV34A0A0B4J273 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
TRAV34A0A0B4J273 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV34A0A0B4J273 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV34A0A0B4J273 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV34A0A0B4J273 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV34A0A0B4J273 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV34A0A0B4J273 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV34A0A0B4J273 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV34A0A0B4J273 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV34A0A0B4J273 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 AC005559.1-201ENST00000589661 871 ntBASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 AC142381.3-201ENST00000568208 1670 ntBASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 WHAMMP3-201ENST00000611636 1609 ntBASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV34A0A0B4J273 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 AC010501.1-201ENST00000606270 1962 ntBASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV34A0A0B4J273 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV34A0A0B4J273 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
TRAV34A0A0B4J273 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV34A0A0B4J273 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV34A0A0B4J273 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV34A0A0B4J273 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV34A0A0B4J273 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV34A0A0B4J273 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TRAV34A0A0B4J273 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV34A0A0B4J273 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV34A0A0B4J273 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV34A0A0B4J273 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV34A0A0B4J273 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV34A0A0B4J273 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV34A0A0B4J273 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV34A0A0B4J273 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRAV34A0A0B4J273 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRAV34A0A0B4J273 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV34A0A0B4J273 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV34A0A0B4J273 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV34A0A0B4J273 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms