Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAV12-1A0A0B4J245 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-1A0A0B4J245 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-1A0A0B4J245 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV12-1A0A0B4J245 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRAV12-1A0A0B4J245 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAV12-1A0A0B4J245 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.33
TRAV12-1A0A0B4J245 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-1A0A0B4J245 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-1A0A0B4J245 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-1A0A0B4J245 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRAV12-1A0A0B4J245 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-1A0A0B4J245 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV12-1A0A0B4J245 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV12-1A0A0B4J245 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV12-1A0A0B4J245 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-1A0A0B4J245 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV12-1A0A0B4J245 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-1A0A0B4J245 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAV12-1A0A0B4J245 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-1A0A0B4J245 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV12-1A0A0B4J245 AC135983.2-203ENST00000454486 1613 ntBASIC17.06■□□□□ 0.32
TRAV12-1A0A0B4J245 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV12-1A0A0B4J245 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV12-1A0A0B4J245 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV12-1A0A0B4J245 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAV12-1A0A0B4J245 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV12-1A0A0B4J245 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRAV12-1A0A0B4J245 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
TRAV12-1A0A0B4J245 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-1A0A0B4J245 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRAV12-1A0A0B4J245 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-1A0A0B4J245 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV12-1A0A0B4J245 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV12-1A0A0B4J245 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TRAV12-1A0A0B4J245 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV12-1A0A0B4J245 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV12-1A0A0B4J245 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV12-1A0A0B4J245 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV12-1A0A0B4J245 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV12-1A0A0B4J245 AC097639.1-201ENST00000565519 1891 ntBASIC17.02■□□□□ 0.32
TRAV12-1A0A0B4J245 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV12-1A0A0B4J245 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV12-1A0A0B4J245 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV12-1A0A0B4J245 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-1A0A0B4J245 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17■□□□□ 0.31
TRAV12-1A0A0B4J245 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV12-1A0A0B4J245 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV12-1A0A0B4J245 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17■□□□□ 0.31
TRAV12-1A0A0B4J245 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV12-1A0A0B4J245 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV12-1A0A0B4J245 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV12-1A0A0B4J245 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV12-1A0A0B4J245 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV12-1A0A0B4J245 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV12-1A0A0B4J245 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV12-1A0A0B4J245 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV12-1A0A0B4J245 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV12-1A0A0B4J245 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV12-1A0A0B4J245 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 LINC01124-201ENST00000409786 2117 ntBASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-1A0A0B4J245 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms