Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.33■□□□□ 0.53
TRAV9-1A0A075B6T8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV9-1A0A075B6T8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV9-1A0A075B6T8 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV9-1A0A075B6T8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV9-1A0A075B6T8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV9-1A0A075B6T8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV9-1A0A075B6T8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV9-1A0A075B6T8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 DUSP8P5-201ENST00000422884 1815 ntBASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-1A0A075B6T8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV9-1A0A075B6T8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV9-1A0A075B6T8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV9-1A0A075B6T8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV9-1A0A075B6T8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV9-1A0A075B6T8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
TRAV9-1A0A075B6T8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-1A0A075B6T8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV9-1A0A075B6T8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-1A0A075B6T8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAV9-1A0A075B6T8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-1A0A075B6T8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-1A0A075B6T8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV9-1A0A075B6T8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV9-1A0A075B6T8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV9-1A0A075B6T8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.27■□□□□ 0.51
TRAV9-1A0A075B6T8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TRAV9-1A0A075B6T8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV9-1A0A075B6T8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 LINC01124-201ENST00000409786 2117 ntBASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-1A0A075B6T8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-1A0A075B6T8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 DYNLL1-208ENST00000550178 581 ntBASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-1A0A075B6T8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV9-1A0A075B6T8 AC096887.2-201ENST00000623443 1957 ntBASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 AP003733.4-201ENST00000623785 1697 ntBASIC18.22■□□□□ 0.51
TRAV9-1A0A075B6T8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV9-1A0A075B6T8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAV9-1A0A075B6T8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV9-1A0A075B6T8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV9-1A0A075B6T8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV9-1A0A075B6T8 AC006077.2-201ENST00000623591 457 ntBASIC18.21■□□□□ 0.51
TRAV9-1A0A075B6T8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV9-1A0A075B6T8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV9-1A0A075B6T8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV9-1A0A075B6T8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRAV9-1A0A075B6T8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRAV9-1A0A075B6T8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms