Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 AP002414.3-201ENST00000589352 1468 ntBASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 MIR940-201ENST00000401276 94 ntBASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB2Q9Y5E7 AC132938.5-201ENST00000624980 1813 ntBASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 RNA5SP415-201ENST00000517246 115 ntBASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB2Q9Y5E7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 TERC-201ENST00000602385 541 ntBASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 AC019129.2-201ENST00000609837 1235 ntBASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHB2Q9Y5E7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.14■□□□□ 0.66
PCDHB2Q9Y5E7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB2Q9Y5E7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB2Q9Y5E7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDHB2Q9Y5E7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 AL020989.1-201ENST00000422979 469 ntBASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 DDX43P3-201ENST00000441064 443 ntBASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 Z83851.2-201ENST00000609564 659 ntBASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 AC006538.3-201ENST00000612495 578 ntBASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.14■□□□□ 0.65
PCDHB2Q9Y5E7 BX276092.7-203ENST00000637198 1536 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms