Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 LINC00167-201ENST00000530583 1419 ntBASIC16.6■□□□□ 0.25
AP4S1Q9Y587 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
AP4S1Q9Y587 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 LINC02012-201ENST00000608206 1725 ntBASIC16.59■□□□□ 0.25
AP4S1Q9Y587 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.59■□□□□ 0.25
AP4S1Q9Y587 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 MESTP1-201ENST00000404287 994 ntBASIC16.59■□□□□ 0.25
AP4S1Q9Y587 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 MFAP1P1-201ENST00000442257 1255 ntBASIC16.59■□□□□ 0.25
AP4S1Q9Y587 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 AC092171.3-201ENST00000610122 2651 ntBASIC16.59■□□□□ 0.25
AP4S1Q9Y587 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
AP4S1Q9Y587 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
AP4S1Q9Y587 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4S1Q9Y587 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
AP4S1Q9Y587 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP4S1Q9Y587 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP4S1Q9Y587 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP4S1Q9Y587 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
AP4S1Q9Y587 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.58■□□□□ 0.25
AP4S1Q9Y587 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
AP4S1Q9Y587 AC078925.2-201ENST00000624013 1973 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms