Protein–RNA interactions for Protein: Q9Y4G8

RAPGEF2, Rap guanine nucleotide exchange factor 2, humanhuman

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2Q9Y4G8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 AL139327.4-201ENST00000612362 153 ntBASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 MIR770-201ENST00000390219 98 ntBASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC28.21■■■□□ 2.11
RAPGEF2Q9Y4G8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RAPGEF2Q9Y4G8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC28.2■■■□□ 2.11
RAPGEF2Q9Y4G8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 HLA-J-203ENST00000494367 1087 ntBASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF2Q9Y4G8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF2Q9Y4G8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 FAM8A3P-201ENST00000427218 844 ntBASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 AC109322.1-201ENST00000524499 1264 ntBASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 AC009093.7-201ENST00000623853 1223 ntBASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RAPGEF2Q9Y4G8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 AL513480.1-201ENST00000451731 511 ntBASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 AC093520.2-201ENST00000561830 333 ntBASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 AC135050.7-201ENST00000624508 2218 ntBASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF2Q9Y4G8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 CALY-203ENST00000368558 825 ntTSL 5 BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 AL355306.1-201ENST00000415580 579 ntBASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC28.16■■■□□ 2.1
RAPGEF2Q9Y4G8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms