Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 AP003733.1-201ENST00000491725 852 ntBASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 AL353692.3-201ENST00000407031 1396 ntBASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 ZNF444P1-201ENST00000559497 298 ntBASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 AC016396.2-201ENST00000562575 1417 ntBASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 LINC01311-201ENST00000565162 1445 ntBASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 AC139887.4-201ENST00000607877 719 ntBASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP2BQ9UQN3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 MTCL1P1-201ENST00000446207 792 ntBASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 YBX1P2-201ENST00000489612 999 ntBASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP2BQ9UQN3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms