Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2IRD1Q9UHL9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2IRD1Q9UHL9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2IRD1Q9UHL9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2IRD1Q9UHL9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2IRD1Q9UHL9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
GTF2IRD1Q9UHL9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 AL354751.1-201ENST00000412768 1863 ntBASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 AP000344.2-201ENST00000512987 629 ntBASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF2IRD1Q9UHL9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GTF2IRD1Q9UHL9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2IRD1Q9UHL9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2IRD1Q9UHL9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.14■□□□□ 0.66
GTF2IRD1Q9UHL9 AL135999.2-201ENST00000622438 1686 ntBASIC19.14■□□□□ 0.66
GTF2IRD1Q9UHL9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2IRD1Q9UHL9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.14■□□□□ 0.66
GTF2IRD1Q9UHL9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2IRD1Q9UHL9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms