Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC116407.2-201ENST00000613639 860 ntBASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 AL121956.5-201ENST00000625261 221 ntBASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCM2LQ9NUG4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CCM2LQ9NUG4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCM2LQ9NUG4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 MFAP1P1-201ENST00000442257 1255 ntBASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 HCG4P8-203ENST00000443049 980 ntBASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 CCR12P-201ENST00000446203 998 ntBASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCM2LQ9NUG4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 AC009949.1-201ENST00000623048 1830 ntBASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 AC011558.1-201ENST00000623459 338 ntBASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCM2LQ9NUG4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCM2LQ9NUG4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms