Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TLR9Q9NR96 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
TLR9Q9NR96 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 CXCL1P1-201ENST00000502804 216 ntBASIC18.5■□□□□ 0.55
TLR9Q9NR96 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 SPCS2P1-201ENST00000561636 679 ntBASIC18.5■□□□□ 0.55
TLR9Q9NR96 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 AC092902.6-201ENST00000641783 218 ntBASIC18.5■□□□□ 0.55
TLR9Q9NR96 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.5■□□□□ 0.55
TLR9Q9NR96 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TLR9Q9NR96 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR9Q9NR96 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 AL138781.2-201ENST00000617896 1843 ntBASIC18.49■□□□□ 0.55
TLR9Q9NR96 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 AC002558.1-201ENST00000488906 803 ntBASIC18.49■□□□□ 0.55
TLR9Q9NR96 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 AC068137.2-201ENST00000605408 478 ntBASIC18.49■□□□□ 0.55
TLR9Q9NR96 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 AC007613.1-201ENST00000572811 2597 ntBASIC18.49■□□□□ 0.55
TLR9Q9NR96 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR9Q9NR96 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TLR9Q9NR96 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 MYCLP1-201ENST00000372451 1075 ntBASIC18.48■□□□□ 0.55
TLR9Q9NR96 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 AC105339.1-204ENST00000636249 355 ntBASIC18.48■□□□□ 0.55
TLR9Q9NR96 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.48■□□□□ 0.55
TLR9Q9NR96 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR9Q9NR96 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms