Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 CRYGFP-201ENST00000418459 633 ntBASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 KRT18P23-201ENST00000435622 1283 ntBASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 KRT18P55-202ENST00000578578 1546 ntBASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C12orf4Q9NQ89 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 KRT18P29-201ENST00000397031 1267 ntBASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 AC006116.8-202ENST00000587620 1550 ntBASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.3■□□□□ 0.04
C12orf4Q9NQ89 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C12orf4Q9NQ89 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms