Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRCC1Q9NPI7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.12■□□□□ 0.17
KRCC1Q9NPI7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 AC004263.2-201ENST00000617183 678 ntBASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.11■□□□□ 0.17
KRCC1Q9NPI7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
KRCC1Q9NPI7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 TSPY15P-201ENST00000457163 923 ntBASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 COX11P1-201ENST00000489116 835 ntBASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 AL138966.2-201ENST00000621997 464 ntBASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 AL023973.1-201ENST00000624619 620 ntBASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 LINC01311-201ENST00000565162 1445 ntBASIC16.09■□□□□ 0.17
KRCC1Q9NPI7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms