Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 LINC00602-201ENST00000629776 2065 ntBASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 TSSC2-201ENST00000450217 709 ntBASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 RN7SL606P-201ENST00000472779 293 ntBASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.09■□□□□ 0.33
CLK4Q9HAZ1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CLK4Q9HAZ1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLK4Q9HAZ1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.08■□□□□ 0.33
CLK4Q9HAZ1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.08■□□□□ 0.33
CLK4Q9HAZ1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLK4Q9HAZ1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLK4Q9HAZ1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 ATP5G2P1-201ENST00000433580 426 ntBASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLK4Q9HAZ1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 AL353801.3-201ENST00000609898 542 ntBASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 IGHV3-41-201ENST00000613121 348 ntBASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms