Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRIM6Q9C030 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6Q9C030 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.26■□□□□ 0.67
TRIM6Q9C030 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6Q9C030 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6Q9C030 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM6Q9C030 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6Q9C030 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6Q9C030 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6Q9C030 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6Q9C030 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM6Q9C030 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRIM6Q9C030 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRIM6Q9C030 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 PRORSD1P-202ENST00000563365 2154 ntBASIC19.25■□□□□ 0.67
TRIM6Q9C030 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 NKAPP1-205ENST00000585790 367 ntBASIC19.25■□□□□ 0.67
TRIM6Q9C030 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM6Q9C030 BX276092.7-203ENST00000637198 1536 ntBASIC19.25■□□□□ 0.67
TRIM6Q9C030 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM6Q9C030 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 AL390961.4-201ENST00000623958 2535 ntBASIC19.24■□□□□ 0.67
TRIM6Q9C030 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 PMPCAP1-201ENST00000508114 1576 ntBASIC19.24■□□□□ 0.67
TRIM6Q9C030 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 RPS2P1-201ENST00000434010 821 ntBASIC19.24■□□□□ 0.67
TRIM6Q9C030 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 OR7E14P-202ENST00000530490 1290 ntBASIC19.24■□□□□ 0.67
TRIM6Q9C030 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 AD001527.2-201ENST00000622994 785 ntBASIC19.24■□□□□ 0.67
TRIM6Q9C030 FAM215A-202ENST00000632077 792 ntBASIC19.24■□□□□ 0.67
TRIM6Q9C030 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 FLJ13224-201ENST00000313737 1514 ntBASIC19.24■□□□□ 0.67
TRIM6Q9C030 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 IL9RP2-201ENST00000423948 1312 ntBASIC19.24■□□□□ 0.67
TRIM6Q9C030 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM6Q9C030 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM6Q9C030 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM6Q9C030 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TRIM6Q9C030 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms