Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 AC026396.1-201ENST00000419388 421 ntBASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 AC011498.5-201ENST00000592027 486 ntBASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF3BQ9BZI7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 AC007967.3-201ENST00000434308 558 ntBASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 AC124864.1-201ENST00000623408 392 ntBASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF3BQ9BZI7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.89■□□□□ 0.94
UPF3BQ9BZI7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UPF3BQ9BZI7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UPF3BQ9BZI7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UPF3BQ9BZI7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UPF3BQ9BZI7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
UPF3BQ9BZI7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UPF3BQ9BZI7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
UPF3BQ9BZI7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 COX5BP2-201ENST00000392354 334 ntBASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 AC005336.2-201ENST00000593183 939 ntBASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF3BQ9BZI7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 AC097374.2-201ENST00000618617 1306 ntBASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UPF3BQ9BZI7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms