Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
NPAS1Q99742 KRT8P10-201ENST00000450021 1447 ntBASIC15.97■□□□□ 0.15
NPAS1Q99742 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 AKR1C7P-201ENST00000305623 895 ntBASIC15.97■□□□□ 0.15
NPAS1Q99742 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
NPAS1Q99742 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPAS1Q99742 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 AC132008.2-207ENST00000454517 770 ntBASIC15.97■□□□□ 0.15
NPAS1Q99742 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS1Q99742 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.97■□□□□ 0.15
NPAS1Q99742 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.97■□□□□ 0.15
NPAS1Q99742 AL591684.3-201ENST00000605187 298 ntBASIC15.97■□□□□ 0.15
NPAS1Q99742 IFNL4P1-201ENST00000607083 540 ntBASIC15.97■□□□□ 0.15
NPAS1Q99742 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.97■□□□□ 0.15
NPAS1Q99742 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS1Q99742 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
NPAS1Q99742 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPAS1Q99742 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.97■□□□□ 0.15
NPAS1Q99742 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NPAS1Q99742 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPAS1Q99742 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.97■□□□□ 0.15
NPAS1Q99742 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS1Q99742 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 AC084018.2-201ENST00000613093 2607 ntBASIC15.96■□□□□ 0.15
NPAS1Q99742 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS1Q99742 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.96■□□□□ 0.15
NPAS1Q99742 KRT16P4-201ENST00000453883 522 ntBASIC15.96■□□□□ 0.15
NPAS1Q99742 AC122714.2-201ENST00000502787 707 ntBASIC15.96■□□□□ 0.15
NPAS1Q99742 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.96■□□□□ 0.15
NPAS1Q99742 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.96■□□□□ 0.15
NPAS1Q99742 AC091304.2-201ENST00000564639 760 ntBASIC15.96■□□□□ 0.15
NPAS1Q99742 AC109462.3-201ENST00000573934 613 ntBASIC15.96■□□□□ 0.15
NPAS1Q99742 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.96■□□□□ 0.15
NPAS1Q99742 AP001269.4-201ENST00000609611 512 ntBASIC15.96■□□□□ 0.15
NPAS1Q99742 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NPAS1Q99742 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPAS1Q99742 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPAS1Q99742 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.14
NPAS1Q99742 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS1Q99742 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS1Q99742 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS1Q99742 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPAS1Q99742 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.96■□□□□ 0.14
NPAS1Q99742 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.96■□□□□ 0.14
NPAS1Q99742 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.96■□□□□ 0.14
NPAS1Q99742 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NPAS1Q99742 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS1Q99742 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.95■□□□□ 0.14
NPAS1Q99742 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPAS1Q99742 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
NPAS1Q99742 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms