Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RAD9AQ99638 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.59■□□□□ 0.57
RAD9AQ99638 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.59■□□□□ 0.57
RAD9AQ99638 AC129492.6-201ENST00000611383 1305 ntBASIC18.59■□□□□ 0.57
RAD9AQ99638 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
RAD9AQ99638 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RAD9AQ99638 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.59■□□□□ 0.57
RAD9AQ99638 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.59■□□□□ 0.57
RAD9AQ99638 AC069335.1-201ENST00000489972 472 ntBASIC18.59■□□□□ 0.57
RAD9AQ99638 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.59■□□□□ 0.57
RAD9AQ99638 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.59■□□□□ 0.57
RAD9AQ99638 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.59■□□□□ 0.57
RAD9AQ99638 AL512356.2-201ENST00000546955 174 ntBASIC18.59■□□□□ 0.57
RAD9AQ99638 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RAD9AQ99638 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.59■□□□□ 0.57
RAD9AQ99638 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAD9AQ99638 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD9AQ99638 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
RAD9AQ99638 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.58■□□□□ 0.57
RAD9AQ99638 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAD9AQ99638 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RAD9AQ99638 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAD9AQ99638 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAD9AQ99638 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.58■□□□□ 0.57
RAD9AQ99638 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAD9AQ99638 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAD9AQ99638 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.58■□□□□ 0.57
RAD9AQ99638 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAD9AQ99638 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.58■□□□□ 0.56
RAD9AQ99638 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.58■□□□□ 0.56
RAD9AQ99638 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RAD9AQ99638 AL592309.1-201ENST00000443127 649 ntBASIC18.58■□□□□ 0.56
RAD9AQ99638 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.58■□□□□ 0.56
RAD9AQ99638 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.58■□□□□ 0.56
RAD9AQ99638 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAD9AQ99638 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.58■□□□□ 0.56
RAD9AQ99638 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.58■□□□□ 0.56
RAD9AQ99638 AC051619.7-201ENST00000568314 623 ntBASIC18.58■□□□□ 0.56
RAD9AQ99638 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 AC099522.2-201ENST00000607001 744 ntBASIC18.58■□□□□ 0.56
RAD9AQ99638 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.58■□□□□ 0.56
RAD9AQ99638 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.58■□□□□ 0.56
RAD9AQ99638 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.58■□□□□ 0.56
RAD9AQ99638 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAD9AQ99638 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.58■□□□□ 0.56
RAD9AQ99638 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.57■□□□□ 0.56
RAD9AQ99638 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAD9AQ99638 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.57■□□□□ 0.56
RAD9AQ99638 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.57■□□□□ 0.56
RAD9AQ99638 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.57■□□□□ 0.56
RAD9AQ99638 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.57■□□□□ 0.56
RAD9AQ99638 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RAD9AQ99638 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RAD9AQ99638 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.57■□□□□ 0.56
RAD9AQ99638 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.57■□□□□ 0.56
RAD9AQ99638 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 AC140658.5-201ENST00000438532 169 ntBASIC18.57■□□□□ 0.56
RAD9AQ99638 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.57■□□□□ 0.56
RAD9AQ99638 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.57■□□□□ 0.56
RAD9AQ99638 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.57■□□□□ 0.56
RAD9AQ99638 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAD9AQ99638 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms