Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.61■□□□□ 0.41
NDNQ99608 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.61■□□□□ 0.41
NDNQ99608 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.61■□□□□ 0.41
NDNQ99608 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.61■□□□□ 0.41
NDNQ99608 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.61■□□□□ 0.41
NDNQ99608 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.61■□□□□ 0.41
NDNQ99608 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.61■□□□□ 0.41
NDNQ99608 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.61■□□□□ 0.41
NDNQ99608 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.61■□□□□ 0.41
NDNQ99608 LINC01451-201ENST00000623792 534 ntBASIC17.61■□□□□ 0.41
NDNQ99608 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NDNQ99608 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.61■□□□□ 0.41
NDNQ99608 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NDNQ99608 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NDNQ99608 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NDNQ99608 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.6■□□□□ 0.41
NDNQ99608 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.6■□□□□ 0.41
NDNQ99608 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
NDNQ99608 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 KRT18P21-201ENST00000515767 1272 ntBASIC17.6■□□□□ 0.41
NDNQ99608 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.6■□□□□ 0.41
NDNQ99608 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.6■□□□□ 0.41
NDNQ99608 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.6■□□□□ 0.41
NDNQ99608 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.6■□□□□ 0.41
NDNQ99608 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.6■□□□□ 0.41
NDNQ99608 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.6■□□□□ 0.41
NDNQ99608 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.6■□□□□ 0.41
NDNQ99608 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NDNQ99608 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.59■□□□□ 0.41
NDNQ99608 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NDNQ99608 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.59■□□□□ 0.41
NDNQ99608 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NDNQ99608 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.59■□□□□ 0.41
NDNQ99608 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.59■□□□□ 0.41
NDNQ99608 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.59■□□□□ 0.41
NDNQ99608 AL645929.1-201ENST00000420084 975 ntBASIC17.59■□□□□ 0.41
NDNQ99608 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.59■□□□□ 0.41
NDNQ99608 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NDNQ99608 AC068418.2-201ENST00000577309 3703 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms