Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 AC116407.3-201ENST00000623905 1129 ntBASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 OR6D1P-202ENST00000641007 5290 ntBASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 AC243591.1-201ENST00000452967 1364 ntBASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 AC046185.3-201ENST00000623228 1824 ntBASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 AC133963.1-201ENST00000504166 1679 ntBASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 KRT18P27-201ENST00000427733 1299 ntBASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 AL049840.3-201ENST00000602669 611 ntBASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 AC004706.3-202ENST00000621574 984 ntBASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK5RAP1Q96SZ6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 ACTG1P4-201ENST00000425123 1122 ntBASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDK5RAP1Q96SZ6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDK5RAP1Q96SZ6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDK5RAP1Q96SZ6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.14■□□□□ 0.5
CDK5RAP1Q96SZ6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDK5RAP1Q96SZ6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDK5RAP1Q96SZ6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDK5RAP1Q96SZ6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms