Protein–RNA interactions for Protein: Q96S94

CCNL2, Cyclin-L2, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL2Q96S94 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCNL2Q96S94 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCNL2Q96S94 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCNL2Q96S94 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCNL2Q96S94 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCNL2Q96S94 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCNL2Q96S94 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCNL2Q96S94 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCNL2Q96S94 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCNL2Q96S94 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.64■□□□□ 0.26
CCNL2Q96S94 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.64■□□□□ 0.26
CCNL2Q96S94 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 CNN2P11-201ENST00000429351 262 ntBASIC16.64■□□□□ 0.25
CCNL2Q96S94 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 AC008764.6-201ENST00000595909 2069 ntBASIC16.64■□□□□ 0.25
CCNL2Q96S94 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 PHGDH-209ENST00000641074 1780 ntBASIC16.64■□□□□ 0.25
CCNL2Q96S94 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
CCNL2Q96S94 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCNL2Q96S94 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 AC090340.1-201ENST00000620778 4980 ntBASIC16.63■□□□□ 0.25
CCNL2Q96S94 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 ALG1L5P-201ENST00000482043 771 ntBASIC16.63■□□□□ 0.25
CCNL2Q96S94 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 AP002472.1-201ENST00000577490 586 ntBASIC16.63■□□□□ 0.25
CCNL2Q96S94 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 AL096828.2-201ENST00000567259 1965 ntBASIC16.63■□□□□ 0.25
CCNL2Q96S94 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CCNL2Q96S94 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 AC093010.1-201ENST00000473625 1624 ntBASIC16.63■□□□□ 0.25
CCNL2Q96S94 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCNL2Q96S94 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.62■□□□□ 0.25
CCNL2Q96S94 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNL2Q96S94 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCNL2Q96S94 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNL2Q96S94 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNL2Q96S94 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCNL2Q96S94 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.62■□□□□ 0.25
CCNL2Q96S94 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCNL2Q96S94 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.62■□□□□ 0.25
CCNL2Q96S94 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CCNL2Q96S94 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCNL2Q96S94 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms