Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AP003041.3-201ENST00000527151 707 ntBASIC14.24□□□□□ -0.13
RAB40CQ96S21 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 CD177P1-201ENST00000606252 935 ntBASIC14.24□□□□□ -0.13
RAB40CQ96S21 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AC005915.1-201ENST00000624912 2018 ntBASIC14.24□□□□□ -0.13
RAB40CQ96S21 LINC01311-201ENST00000565162 1445 ntBASIC14.24□□□□□ -0.13
RAB40CQ96S21 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 AC012618.2-201ENST00000428058 849 ntBASIC14.23□□□□□ -0.13
RAB40CQ96S21 SLC25A1P2-201ENST00000430693 912 ntBASIC14.23□□□□□ -0.13
RAB40CQ96S21 NUDT16P1-203ENST00000513809 620 ntBASIC14.23□□□□□ -0.13
RAB40CQ96S21 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 AL353719.1-201ENST00000566847 864 ntBASIC14.23□□□□□ -0.13
RAB40CQ96S21 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 BX276092.7-203ENST00000637198 1536 ntBASIC14.23□□□□□ -0.13
RAB40CQ96S21 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40CQ96S21 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40CQ96S21 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 AC233702.5-201ENST00000584107 538 ntBASIC14.22□□□□□ -0.13
RAB40CQ96S21 AL023803.3-201ENST00000615559 522 ntBASIC14.22□□□□□ -0.13
RAB40CQ96S21 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms