Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 COX5BP2-201ENST00000392354 334 ntBASIC16.63■□□□□ 0.25
BBS4Q96RK4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 AC116407.4-201ENST00000623319 1061 ntBASIC16.63■□□□□ 0.25
BBS4Q96RK4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 AC010460.3-201ENST00000511359 1579 ntBASIC16.63■□□□□ 0.25
BBS4Q96RK4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BBS4Q96RK4 IER3-202ENST00000376377 1350 ntBASIC16.63■□□□□ 0.25
BBS4Q96RK4 AC016734.2-201ENST00000624325 1377 ntBASIC16.63■□□□□ 0.25
BBS4Q96RK4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.63■□□□□ 0.25
BBS4Q96RK4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 KRT18P1-202ENST00000452408 1331 ntBASIC16.62■□□□□ 0.25
BBS4Q96RK4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 AC125634.1-201ENST00000438758 1403 ntBASIC16.62■□□□□ 0.25
BBS4Q96RK4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BBS4Q96RK4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BBS4Q96RK4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.61■□□□□ 0.25
BBS4Q96RK4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BBS4Q96RK4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.61■□□□□ 0.25
BBS4Q96RK4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
BBS4Q96RK4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
BBS4Q96RK4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BBS4Q96RK4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BBS4Q96RK4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.61■□□□□ 0.25
BBS4Q96RK4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BBS4Q96RK4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BBS4Q96RK4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.61■□□□□ 0.25
BBS4Q96RK4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms