Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
SUSD3Q96L08 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SUSD3Q96L08 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 YBX2P1-201ENST00000394192 760 ntBASIC18.48■□□□□ 0.55
SUSD3Q96L08 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 MRPL20P1-201ENST00000400819 433 ntBASIC18.48■□□□□ 0.55
SUSD3Q96L08 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.48■□□□□ 0.55
SUSD3Q96L08 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 AC010654.1-201ENST00000615722 808 ntBASIC18.48■□□□□ 0.55
SUSD3Q96L08 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SUSD3Q96L08 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SUSD3Q96L08 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 MIR1233-2-201ENST00000408138 82 ntBASIC18.47■□□□□ 0.55
SUSD3Q96L08 MIR1233-1-201ENST00000408722 82 ntBASIC18.47■□□□□ 0.55
SUSD3Q96L08 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 AC002347.1-201ENST00000569543 541 ntBASIC18.47■□□□□ 0.55
SUSD3Q96L08 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SUSD3Q96L08 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.47■□□□□ 0.55
SUSD3Q96L08 AC020763.4-201ENST00000623414 4170 ntBASIC18.46■□□□□ 0.55
SUSD3Q96L08 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SUSD3Q96L08 LYSMD4-203ENST00000378904 2122 ntBASIC18.46■□□□□ 0.55
SUSD3Q96L08 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SUSD3Q96L08 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SUSD3Q96L08 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SUSD3Q96L08 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 AC023274.1-201ENST00000418278 595 ntBASIC18.46■□□□□ 0.55
SUSD3Q96L08 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.46■□□□□ 0.55
SUSD3Q96L08 AL355312.1-201ENST00000407115 2176 ntBASIC18.46■□□□□ 0.55
SUSD3Q96L08 AC133963.1-201ENST00000504166 1679 ntBASIC18.46■□□□□ 0.55
SUSD3Q96L08 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms