Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5RAP3Q96JB5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 SIRPAP1-201ENST00000448467 1770 ntBASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 AC002558.1-201ENST00000488906 803 ntBASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 AC122714.2-201ENST00000502787 707 ntBASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 IGHV3-52-201ENST00000519770 353 ntBASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 TP73-AS1-210ENST00000637775 1455 ntBASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 AL138688.1-201ENST00000624851 1594 ntBASIC19.78■□□□□ 0.76
CDK5RAP3Q96JB5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 IGHV3-47-201ENST00000425060 335 ntBASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 AC103564.2-201ENST00000432853 1299 ntBASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 AC109462.3-201ENST00000573934 613 ntBASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDK5RAP3Q96JB5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDK5RAP3Q96JB5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDK5RAP3Q96JB5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDK5RAP3Q96JB5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 AC111152.3-201ENST00000569699 673 ntBASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 AC099336.1-202ENST00000602961 463 ntBASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDK5RAP3Q96JB5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP3Q96JB5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDK5RAP3Q96JB5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDK5RAP3Q96JB5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms